Thamnophis sirtalis (common garter snake): 106556574
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Entry
106556574 CDS
T06107
Name
(RefSeq) partitioning defective 6 homolog alpha-like
KO
K06093
partitioning defective protein 6
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04144
Endocytosis
tsr04517
IgSF CAM signaling
tsr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106556574
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106556574
09144 Cellular community - eukaryotes
04530 Tight junction
106556574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106556574
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
106556574
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
106556574
NCBI-ProteinID:
XP_013931034
UniProt:
A0A6I9Z484
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MAKNHRTPARSSEPVIEVKSKFEAEFRRFAMKRSSVGGFQEFYQLIQRVHQIPCSEVLLG
YTDIHGDLLPINNDDNYHKALSSANPLLRIIIQKRAEANASVFASNSLQRKKKGLLRPTH
QRAKPHLLIGMPQDFRQISSIIDVDILPETHRRVRLHKHGSNKPLGFYIRDGVSVRVAHH
GVEKVPGIFISRLVKGGLAESTGLLAVNDEILEVNGIDVAGKSLDQVTDMMVANSHNLII
TVKPANQRNNVIRSSKASGSSGMSTDSTPSQQTPSPASQYLSNCSTAEGESDEEGDLVIE
SDLPASCPNGGLLDSLQHSLSLYSSQGSLPSLNSHSGSGSPMRGSRTGSLQEDGTIITL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaccaccgcacaccggcgcgcagctcggagccggtcattgaggtcaaaagc
aagttcgaagctgagtttcgccgttttgccatgaagaggtccagcgtgggtggtttccag
gaattctaccagctgatccagagggtgcaccagatcccttgttcggaggttctcctggga
tacacagacatccatggagatttgcttcccatcaacaatgatgataactatcacaaggct
ctgtcttcggccaatcctcttctccggatcatcatccagaagagagcagaagccaacgcc
agcgtctttgcctccaactccctgcagcggaagaaaaagggactgctgaggccgacgcac
caacgggccaagccccacctgttgatcggcatgccccaggacttccgccagatctcctcc
atcatcgacgtggacatcttgcccgagacccaccggcgggtgcggctccataaacacggc
tccaacaagcccctgggcttttatatccgggatggggtcagtgtgcgagtggctcatcac
ggggtggagaaggtgcccggcatcttcatctcccgcttggtcaagggaggtttggctgag
agcactggactgctggccgtcaacgacgagatcctcgaagtcaacggcatcgacgtggcg
ggcaagtcgctggaccaggtcaccgacatgatggtggccaacagccacaatctcatcatc
accgtcaagccggccaatcaacgcaacaacgtcatccgcagcagcaaggcttccgggagt
tccggcatgtccacggacagcacgcccagccagcagacgcccagcccggcttcccagtac
ctgagcaactgtagcacagccgagggggaaagcgatgaggagggagacctggtcattgag
agtgacttgcctgccagctgccccaacgggggtcttcttgacagcctccagcacagcctc
tcgctctatagctcccaagggtccctgccttccctgaacagtcacagtggcagcgggagc
cccatgcggggcagccgaacgggcagcctccaggaggatggcaccatcatcaccctatag
DBGET
integrated database retrieval system
