Thamnophis sirtalis (common garter snake): 106556591
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Entry
106556591 CDS
T06107
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
tsr03015
mRNA surveillance pathway
tsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106556591
09122 Translation
03013 Nucleocytoplasmic transport
106556591
03015 mRNA surveillance pathway
106556591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106556591
03041 Spliceosome [BR:
tsr03041
]
106556591
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106556591
Spliceosome [BR:
tsr03041
]
Complex C
Other components
EJC/TREX
106556591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
106556591
NCBI-ProteinID:
XP_013931052
UniProt:
A0A6I9Z327
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MARLGGEKETPFSGVRSSSVAAVLVSIPVIKRASKPVTNIASLLLLRIVLAERTQRTVLI
CVIMYRIPARTVKTAGGGHALVSEEREPSLRSRRAAQRVPVKEEEEEEEEEEEEEEEEEE
EEEEEEDAPPLLVGQTPMRPEEPGMPAPQETGILQASLPIVLQAQQTETRSQTPDSPSGE
AAIPVLAHLQRSEDEEAQPRATDPGEKQQAALIPAESPVEKDSLPDPPKEVAPQLPEALK
METEEDPKEPRSTETPQEEKEEEEMMEQGETPAAVVLQKEGEPQNKGTPEAEATQALRRL
EEEASAAAAALVHASPSPPQLTEAQQSQQDPRGDEPPPPLLTKEAPAGLAPAEDEAPPQL
SQLSPPAQEAPTVASRGASPSPLALPPHQPVRAGSSRSSSSSSSSSSRSRSRSPGSSPPR
SRARRTRSASSESPARKRPALESRSRSGSERRSSSESRSRSSSRGSSSSKSRSREASRDS
TSFPPTKEPSRPGACFPPHSAKAQHQEIPSSPREEGRRTPSPPARQHSHTPPPQPPARSM
QAESTFPERGRPEPLNPTVTEESVLDIGGLASEPPRPIEPPGSKTEEKQTMPMELSEPQP
ENEALEPGGPEDQPSAEPPGPEDEEKKEGSTQPKAFKRKISVVSSSVTKGPVATNSDTEG
SQPAGRKRRWGASTATTQKKPSISITTESLKSLIPEIKPPLGGQEAVVDLHADDSRISED
EAERHLEEPAHEKALKICRTVTQVVPVEGQENGQGEEEEEEEEK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcccggttgggtggagaaaaggaaaccccgttctctggcgtcaggtcctcgagtgtc
gccgcggtgttggtttccattcccgtcattaaaagagcctcgaaaccagtgacaaacatc
gcgagcctcctcttattgcgcatcgtcctcgccgagaggacccagcgaaccgtgctcatc
tgtgtgatcatgtatagaattccagcccgaacagtgaagaccgcgggaggtggccatgca
ctggtgagcgaagagcgggagccttcccttcggagtcggagagctgcccagcgggtgccg
gtcaaagaggaggaagaagaagaggaagaggaagaagaggaggaggaggaggaagaagag
gaggaggaggaggaagaagatgcacctcctttgctggtcggccagacgcccatgaggccg
gaggagccgggcatgccagctccccaagagacgggcatattgcaagcttccttgcccatc
gtcctgcaagcccagcaaacggagacgcgctctcagaccccagacagcccgagtggcgaa
gccgccataccagtcctcgcgcacttgcagaggtcagaagacgaggaggctcagccccgg
gcaacagaccccggagaaaagcagcaggcagctctaatcccagcggaatcccccgtggaa
aaggattccctcccggatcccccaaaggaggttgcaccccagttacctgaagccttaaaa
atggagaccgaggaagacccgaaggagccacggtcgaccgaaactccccaagaggagaag
gaagaggaagagatgatggagcagggcgagaccccggcggctgttgtcttgcagaaggag
ggcgaaccccagaacaaggggaccccagaagcagaggcaacccaggcgctgcgccgccta
gaggaagaggcgtcggcagccgcggcggcgctggtgcacgcctctccatctcccccgcag
ctgaccgaagcacaacagtcccaacaggatccccgtggggacgagccgcctccaccactc
ctgaccaaggaagcccctgcgggactcgctcccgccgaagacgaagcccctcctcagctc
tctcagctgtctccccccgctcaggaagcaccgactgttgccagccgtggagcctcgcca
tcccccttggcgctcccgccacatcagcccgtacgggccggcagctcccgctcgtcctcg
tcctcttcctccagctcctcccgttctcgttcccgctccccgggcagctcgccgccccgc
tcccgggcgaggaggacccgctccgcttcctccgaatcgccggctcggaagcggccagct
ttggaatctcgatcccgctccggctcggagcggcggagcagttcggagtcccgctcccgt
tccagcagcaggggcagcagcagtagcaagtcccgcagccgcgaagcttcccgggacagc
accagcttcccccccaccaaagagccctcccgacccggggcctgcttcccaccccacagc
gccaaagcccagcaccaagagatcccatccagccccagggaagaagggagaaggaccccc
tcccctcctgcgaggcaacacagccacaccccaccaccacaaccaccagcacgcagcatg
caggccgagagcacatttccagaacgaggcaggccagagcctctcaatccaacggtgacg
gaggagtctgtcctagacatcgggggtctcgcctcggagccgccgcgcccgatcgagccg
ccgggcagcaaaaccgaggagaagcagacgatgcccatggagctgtcggagccccagccg
gagaacgaggccctggagcccggtggccccgaggaccagccttccgcagaacccccgggc
cccgaagacgaggagaagaaagagggttcgactcaacccaaggccttcaagaggaaaatc
tccgtcgtctcatcctccgtgaccaaagggccagttgccacaaacagtgacaccgaagga
agccagccggcgggccgcaaacggcgctggggcgccagcaccgccacgacccagaagaaa
ccttcgatcagcatcaccaccgaatccctcaagagcctgatcccagagattaagccaccg
ctaggaggtcaggaagctgtggtggaccttcacgccgacgactcccgcatctccgaagac
gaagccgagcgccacttggaagagccagctcacgagaaagcgctcaagatctgccgtacc
gtcacgcaggtggtcccggttgaagggcaagagaacggccaaggggaggaagaggaagag
gaagaggaaaag
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