Thamnophis sirtalis (common garter snake): 106556634
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Entry
106556634 CDS
T06107
Name
(RefSeq) m7GpppX diphosphatase-like
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106556634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106556634
Enzymes [BR:
tsr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
106556634
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
106556634
3'-5' decay
Other 3'-5' decay factors
106556634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS
DcpS_C
DUF2145
Motif
Other DBs
NCBI-GeneID:
106556634
NCBI-ProteinID:
XP_013931091
UniProt:
A0A6I9Z544
LinkDB
All DBs
Position
Unknown
AA seq
203 aa
AA seq
DB search
MAESPALKRKCEEKEEENGSAASQNEEPAPGNFPLAELSVMKVLRESAREKTIFLHGRVN
GASGDKADAVVILEKIPFQEENITELLKKHTGLQLQVSNDIYSTYHLFLPPELNEIKTTV
VYPATEKHLQKYLSRSVYLIQETGEDYKTITLPFIESQSISIQWVYNILEKKAEADRIVY
ENPDPIDGFVLIPDFKWNQKQLE
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggccgagtctcccgctctgaagagaaaatgtgaggagaaagaggaagagaacggatcc
gccgcgtctcaaaatgaagagccggcccccggcaacttccctttggccgaactctctgtg
atgaaagtgctcagggaatctgcgcgggagaagacgatcttcctccacgggcgggtgaat
ggtgcttctggggataaggcagatgctgttgtgatccttgagaagattcccttccaggaa
gagaacatcactgaactcctaaagaagcacactgggcttcagctccaggtgtccaatgac
atctatagcacttaccacctctttcttcctccagaattaaatgagataaaaactacggtg
gtgtacccagcaaccgaaaaacatcttcaaaaatacttgtctcggtccgtgtatctcatc
caggagacgggagaggattataagaccatcactctgccttttatcgaatcacagagcatc
agcattcagtgggtgtacaacatcctggagaagaaggctgaagctgatcggattgtctat
gaaaatccagatcccatcgacggttttgttctcattccagattttaaatggaatcaaaaa
cagctggag
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