Thamnophis sirtalis (common garter snake): 106556638
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Entry
106556638 CDS
T06107
Symbol
PCNA
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03030
DNA replication
tsr03410
Base excision repair
tsr03420
Nucleotide excision repair
tsr03430
Mismatch repair
tsr04110
Cell cycle
tsr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106556638 (PCNA)
03410 Base excision repair
106556638 (PCNA)
03420 Nucleotide excision repair
106556638 (PCNA)
03430 Mismatch repair
106556638 (PCNA)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106556638 (PCNA)
09144 Cellular community - eukaryotes
04530 Tight junction
106556638 (PCNA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsr03032
]
106556638 (PCNA)
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106556638 (PCNA)
DNA replication proteins [BR:
tsr03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
106556638 (PCNA)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
106556638 (PCNA)
MMR (mismatch excision repair)
Other MMR factors
106556638 (PCNA)
TLS (translesion DNA synthesis) factors
Other TLS factors
106556638 (PCNA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Motif
Other DBs
NCBI-GeneID:
106556638
NCBI-ProteinID:
XP_013931093
UniProt:
A0A6I9Z215
LinkDB
All DBs
Position
Unknown
AA seq
222 aa
AA seq
DB search
MDSSHVSLVQLTMRSEGFDTYRCDRNIAMGVNLLSMSKVLKCAGNDDIITLRAEDNADTL
VLVFETPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSAEFARICRDLSHIGDAVV
ICCTKDGVKFSATGELGSGNVKLSQTSVVDKEEEAVSIEMNEAVQLTFALRYLNFFTKAT
PLSPTVILSMSADVPLVVEYKIADMGHLKYYLAPKIEDQEES
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggactcctcgcatgtctccctggtgcagctcaccatgcgctccgagggcttcgacacc
tatcgctgcgaccgcaacatcgccatgggagtcaatctcctcagtatgtccaaagtgctc
aagtgtgctgggaatgatgacatcatcaccctgagagctgaagacaatgctgacacactg
gttttggtatttgaaacaccaaatcaggagaaggtttcagactatgaaatgaaattaatg
gatttggacgtagaacagcttggaattccagaacaagaatacagctgcgtggtgaaaatg
ccttcggctgaatttgcccgtatctgccgcgacctcagtcacatcggagatgccgttgta
atctgctgcacaaaagatggtgtcaaattttccgccacaggagaacttgggagtggaaac
gtcaaactgtcgcaaaccagtgttgttgataaagaggaggaagctgtatcaatagaaatg
aatgaagctgtccagctgactttcgctttgagatatttgaatttcttcaccaaagctaca
cctttgtctcccacagttatactcagtatgtctgcggatgttcccttagttgtggaatac
aagatagcagatatgggacatttgaaatattatttggccccaaagattgaagaccaagaa
gaatcgtag
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