Thamnophis sirtalis (common garter snake): 106556744
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Entry
106556744 CDS
T06107
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106556744
Ion channels [BR:
tsr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106556744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Ank
Ank_3
YVC1_C
Motif
Other DBs
NCBI-GeneID:
106556744
NCBI-ProteinID:
XP_013931203
UniProt:
A0A6I9Z2B9
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MATEYEGISPSNWKEIVNKKLKFPEGLLAAIQDGQLVKIQQMLHVSDGILRQLDESEDRA
WREALNLAIRTGGVEITKTLLRFVKFDFRQVHEALLVAVDTNQPSVVKQLLDRLDQEKGM
KMDIKSFSMAFFDNSIDNSRFAPGVTPLTLACEKDLYEIVDMLMKKGHTISPPHKVSCAC
LDCSNGRKFDLLKFSLSRINTYKGIASRAYLSIASEDPMLTAFKRSRELKWLSKKEPEFK
PDYLALEDLCQEFAFELLGMCRNQSEVTAVLNELGEDEMDEEDDGMDDQAFEEGIPNLAR
LRLAVNYNQKRFVAHPVCQQVLSSIWCGSLPSWRGSKSLWKVFVSFSIFLGMPFLSLTYF
FAPKSKLGKMLKIPVIKFLLHSASYVWFLVFLLVESLILEHHQDTFQGRNQSMWETSLHM
IWVTGFFWFECKEVWIEGLRSYLLDWWNFLDIVILSMYLASFVLRLLVYLKGQVFCLDIQ
PSTPECYYYTQAKRPDWHTEDPQFMAEVLFAVTSMLSFTRLAYILPAHETLGTLQISIGK
MIDDMIRFMFIMMIILTAFLCGMNNIYVHYPSSERLGSFNKTFQFLFWTMMGMEEHNVVD
MPEFFVAEMVGQVLYGIFTIVMVVVLLNMLIAMITNSFQKIENDADVEWKFARSKLYLSF
FREGLTLPVPFNIIPTPKSIFYAIRGSCRFICCHKGKKNQKYPPINTISNPSVEEGVGRT
ETRLSYRRQVLKALVQRYIDTARRELEESRRKDCQLLNGEELLDLWWLYKRHQ
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggccacggagtacgagggcatctcgccgtccaactggaaggaaatagtcaacaagaag
ctgaagttccccgagggtctcctggctgccatccaagatgggcagctggttaagatccag
cagatgctgcacgtcagcgacgggatcttgcggcagctggacgaaagcgaggaccgggcc
tggcgcgaggcgctcaacttggccatccgcacagggggggtggagatcaccaagaccctc
ttgcgcttcgtgaagttcgacttccggcaggtccacgaggccctcctggtggccgtggac
accaaccagcccagcgtggtcaagcagctcctggaccggctggaccaagagaaaggcatg
aagatggacatcaagtccttctccatggccttcttcgacaactccatcgataactcccgt
ttcgcccccggggtgaccccgctcaccttggcttgcgagaaggacctctacgagatcgtg
gacatgctgatgaagaagggccacaccatttccccgccgcacaaggtctcctgcgcctgc
ctggattgctccaacgggcggaagtttgacctgctcaagttctcgctctcccgcatcaac
acctacaagggcatcgccagccgggcctacctctccatcgccagcgaggaccccatgctg
accgccttcaaacgcagccgggagctcaagtggctctccaagaaggaaccggagttcaag
ccagattacctggcgctggaggacctgtgccaggagtttgcctttgagctcctgggcatg
tgccgcaatcagagcgaggtgacggccgtcctgaacgagctgggggaagacgagatggac
gaggaggacgacgggatggacgaccaggcctttgaggagggcatccccaacttggccagg
ctccgactggcggtcaactacaaccagaaacggtttgtggctcatcccgtctgccagcaa
gtcctgtcgtccatctggtgtgggagcctgcccagctggcggggcagcaaaagcctctgg
aaggtcttcgtctccttctccatcttcctggggatgccgttcctctccctgacctatttc
ttcgcccccaaatccaagctcggcaaaatgctgaaaatcccggtgatcaaattcctgctg
cattcggcctcctacgtctggttcttggtcttcctgctggtggagtccctgatcctggag
caccaccaggacaccttccaggggcgcaaccagagcatgtgggagacgtccctccacatg
atctgggtgacaggcttcttctggtttgagtgcaaggaggtctggatcgaggggctgcgc
agctacttgctggactggtggaacttcctggacatcgtcatcctcagcatgtacttggct
tcctttgtgctcaggctgctggtctacctcaaaggacaggttttctgcctggacatccag
ccttccactccggagtgctactactacacccaagctaagcggccggattggcacactgaa
gacccccagttcatggccgaggtgctctttgctgtcaccagcatgctgagcttcacgcgc
ctggcctacatcctccctgcccacgagaccctggggacgctccagatttccattgggaag
atgattgacgacatgattcgattcatgttcatcatgatgatcatcctgactgctttcctc
tgtggcatgaacaacatctatgtccattatccatcatcggagcgtctgggaagcttcaac
aagaccttccagttcctcttctggacgatgatggggatggaggaacacaacgtggtggac
atgcctgaattcttcgtggctgagatggtgggccaggtgctctatgggatcttcaccatc
gtcatggtggtcgtccttctcaacatgctcattgccatgatcaccaactctttccagaag
atcgagaatgacgccgacgtagagtggaaatttgcccgctcgaagctctacctgtccttc
ttcagggaaggattaacgttgccggttcccttcaacatcatcccgacgcccaagtccatc
ttctatgccatccgaggctcctgtcgcttcatttgctgccacaaaggaaagaagaatcag
aaatatcccccgatcaacaccattagcaacccctcggtggaagagggggtcggccggacg
gaaacccgcctgtcttatcggcgccaggtgctgaaggctctggtgcagcgctacatcgac
acggccaggagggagctggaggagagccggaggaaagattgccaacttcttaatggagag
gaactcttagacctctggtggctctataagaggcatcaatag
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