Thamnophis sirtalis (common garter snake): 106556747
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Entry
106556747 CDS
T06107
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106556747 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106556747 (NUP98)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106556747 (NUP98)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106556747 (NUP98)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106556747 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup98_GLEBS
Nucleoporin2
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
106556747
NCBI-ProteinID:
XP_013931207
UniProt:
A0A6I9Z3I0
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MFNKSFGTPFGGNTGGFGTTSTFGQNTGFGATSGGAFGTSAFGSNNNAGGLFGSTQAKPG
GLFGASTFSQPATSSTSTGFGFGTSTGTSSGLFGTASTGGGLFSTQSNAFAQNKPVGFGN
FGTSTSSGGLFGTTNTASNPFGGTSGSLFGATSFSTVPTGTTIKFNAPTGTDTMVKSGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVVGAGATPGLFGSSTATSSAA
TGLFGSSTTNTGFSYGANKTAFGTSTTGFGTGTGSLFGSTQQTPSLFSKPFGQPTTAQNT
GFSFTNTSTLGQPNTNTMGLFGAAQPTQTGSLFGTAANTNTAAAFGTGTGLFGQPNTGFG
VGGSSLFSNKPAGFGTTTTSAPSFGTTTTGLFGFNANATGNSLFGNKPATGALGPGLGAG
FGTALNPGQNSLFGSTQPKLGGTLGTGAFGAPGFNTSTATLGFGAQQPAVALTDPNVSAA
QQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQTSGSSKSHLFDGLDDDEPSLTNGAFMPKSLSENHRQDEEQDDDNYAREMS
RFLANAIAKPLPLTPENAPHKHHNNSVDDTLVALNVRPALRNGLESSLEEASYHEESLQE
ELDKESEEQLQCTHPAGEVRALEGLGWLTLGSLRWSIHPLCTNPVNWYHKLALEKARGPP
FSSGYGSIYFEGEVNLTNLNLDEIVHVRRKEVIVYPDDELKPPIGEGLNR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatcttttggaacgccttttggcggcaacacaggaggatttgggacaact
tcgactttcgggcagaatactggctttggggcgaccagcgggggagccttcgggacgtct
gccttcggatccaataacaatgccggaggactcttcggtagcactcaggccaagccagga
gggctctttggggcaagtactttcagccagccagccacctcgtccactagtaccggtttt
ggcttcggcacgtccaccggaacgtccagcgggctgtttgggaccgcaagcacaggggga
ggcctcttctcaacccagagcaatgccttcgcccagaacaagccggtgggcttcggcaat
tttgggacaagcaccagcagcggagggttgtttggcaccacgaacacagcctccaacccc
tttgggggcacatctggctccctttttggggctacaagcttttccaccgtccctaccggc
accacgattaaattcaatgcgccaaccggtacggacaccatggtgaagtctggtgtcagc
accaacatcagcaccaagcatcagtgcatcactgctatgaaggagtatgaaagcaaatcg
ctggaggagctccgtttggaagactatcaggccaacaggaaaggccccaccaacccagtg
gtgggagccggagccacgccgggcttgtttgggtcgtcaaccgctacgtccagcgcggcc
acaggactcttcggctcctccaccaccaacacgggcttttcgtacggggcaaataaaaca
gcgttcgggacgagtaccaccggttttgggacaggcaccgggagtctctttggttcgacc
cagcagacgcccagcctcttcagcaaaccttttggtcagcccaccactgcccagaacacg
ggtttctccttcaccaacaccagcacccttgggcagcccaacaccaacaccatgggcttg
ttcggagctgcccagcccacgcagaccggaagccttttcggcacagcggccaacaccaac
acagcagctgcctttggaacaggaaccggactcttcgggcagcccaacaccgggtttggt
gttggtggctcgtctctctttagtaacaagcctgctggcttcggcaccacgaccaccagc
gcaccctcgtttgggacgacgacaactggacttttcgggttcaatgcaaacgccacagga
aacagcctctttggaaacaagcctgcaaccggggctctgggtccaggcctcggggcggga
tttgggacagcccttaatccagggcagaattcgctctttggcagcacgcagcccaagcta
gggggcacgctcgggacaggagccttcggtgctcctggatttaacacatcaaccgccacg
ctgggcttcggagcacaacaacctgctgtggctctgacggatcccaacgtctctgcggcc
cagcaggccgttctgcagcagcacctcaacagcttgacctactcgcccttcggggactct
cctctcttccgaaaccccatgtctgacccaaagaagaaggaggagaggctgaaaccaacc
aacccagcagcccagaaggcactgaccacacccactcattacaaactgactccccgcccg
gcaacccgcgtgcgccccaaagctttgcagacaagcggctcctccaaatcccaccttttt
gacggtctggacgacgatgagccttctctgaccaatggggccttcatgcccaagtcgctt
agtgagaaccacagacaggacgaggagcaggatgacgacaactacgcccgggaaatgtcc
aggttcttagccaacgccattgccaagcccctccccctgaccccggagaacgccccgcac
aagcatcacaacaacagtgtggacgacactctggtggccctgaatgtgcggccggcgctg
cgcaacgggctggaaagcagcctggaggaagcttcctaccacgaggagtccctgcaggag
gagctggacaaggagagcgaagagcagctccagtgcacccatccggcaggtgaggtcaga
gccctggaagggctcggctggttgacccttggctctctcagatggagcattcatccctta
tgcacaaatcccgtcaactggtatcacaagttggcgctcgaaaaagcgcgggggcctccg
ttctcctcaggctacggctccatctactttgagggcgaggtcaatctgaccaacctgaac
ctggatgagatcgtgcacgtccgcaggaaagaggtcatcgtctacccggatgatgaattg
aagccccccatcggggagggcttgaacaggtga
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integrated database retrieval system
