Thamnophis sirtalis (common garter snake): 106556881
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Entry
106556881 CDS
T06107
Symbol
POLB
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106556881 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106556881 (POLB)
Enzymes [BR:
tsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106556881 (POLB)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
106556881 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
106556881 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
HHH_5
HHH_3
Cdd1
HHH_2
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
106556881
NCBI-ProteinID:
XP_013931394
UniProt:
A0A6I9Z5B0
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MPKLVLGGRVRVPAANGPAHAHDVTCRAAAWDSHFVRQARVRSQRDLEELANYEKNVNRA
IHKYNAYRKAASVISKYPSKIKSGSEAKKLDGVGTKIAEKIDEFLSTGKLRKIEKIRQDD
TSSSINLLTRVSGIGPAAARKLVDEGIKTLEDLKKNENKLNHHQRIGLKYFKDFEKRIPR
KEMLEMQDIVLNEVKKVDPAYIASVCGSFRRGAESSGDMDILLTHPDFTSESAKKPKLLH
QVVEQLESIRFVTDTLSKGETKFMGVCQLPGKDDDTVYPYRRIDIRLIPKDQYYCGVLYF
TGSDIFNKNMRTHALEMGFTLNEYTIRPLGITGVAGEPLPVDSEKDIFDYIQWPYREPKE
RSE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaactggtcttggggggacgtgtgcgcgtgcccgccgcgaatggacctgcgcat
gcgcacgacgtgacgtgtcgagccgcggcatgggactcacactttgtaaggcaggcgcgg
gtccgaagtcagcgtgatcttgaagaattggccaactatgaaaagaatgtgaacagagct
attcataaatataatgcttacaggaaagcagcatctgtaatatccaagtaccctagcaag
attaaaagtggatctgaagcaaagaaattggatggcgtaggaactaaaattgctgaaaag
atcgatgaatttttatctactggaaaattacgtaagatagaaaagattcgacaagatgac
acaagctcttctatcaatttactgaccagagttagtggcattggtcctgctgccgccagg
aaactagtagacgaaggtattaaaacattggaagacttaaagaaaaatgaaaataaattg
aatcatcatcaacgcattggactaaaatacttcaaagactttgaaaaaaggattcctagg
aaggagatgcttgaaatgcaggacattgtactgaatgaagtgaagaaagtggaccctgcc
tacattgcttcggtttgtggcagttttcgccgaggtgcagaatccagtggagatatggat
atcctgctgacccacccagacttcacttcagaatctgccaaaaagccaaagcttttgcat
caagttgtggagcagctggaaagcattcgctttgttacggacacactctcaaagggagaa
acaaaattcatgggtgtatgtcagcttccaggtaaagatgatgacaccgtctatccttac
aggagaatcgatatccggttgattcccaaggatcagtattactgtggagtcctctacttc
actggaagtgatatcttcaataagaacatgcggactcacgccttggagatgggcttcacc
ctgaatgagtacaccatccggcctctcggcatcactggagttgcgggggagccactgcct
gtggacagcgagaaggacatctttgactacatccaatggccgtatcgggagcccaaagag
cggagtgaatag
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integrated database retrieval system
