Thamnophis sirtalis (common garter snake): 106556883
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Entry
106556883 CDS
T06107
Symbol
TCOF1
Name
(RefSeq) treacle protein
KO
K14562
Treacher Collins syndrome protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106556883 (TCOF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsr03009
]
106556883 (TCOF1)
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
90S particles
Other 90S particles
106556883 (TCOF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LisH
Motif
Other DBs
NCBI-GeneID:
106556883
NCBI-ProteinID:
XP_013931398
UniProt:
A0A6I9Z2U6
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MATTPREQKELLALIHQQLVQMGYVSAAKELLEQSGQKSLPSSHVSLKEIITQWKQTYSQ
IPKQKAIETKRGTPGKLRIPDPKSSSESSEEEEATQTIKTNLRGNNSTKPTVAKEKSSSE
DSSSDSSSEEEAVAKKTEKTPVAGKKPELLKLAVQNTNSVPGKGVTVAAAQAKGEQNKSV
SNRALPPAARKAGPNKALSSKAGTPSQSLISGGQKTTQTTKTAESSESSSSTSSESEEET
TLTTVKAPPSKPTLKRARSTSKGSSDDSDSEDETKAPTVQIKTAVKNSPITSPLLSKSPV
TPGTCARNTVKVTAAKPASAKSGNANRSPESTDTSETDSSASETKAPASASQASKAPGKN
AASSPSKKAVSASIPSKSTPKATATHLSKPPPPSKEAESSGSSESSSESDSETPPVPISQ
KASTAPGKNAASSPSKKAVSASIPSKSTPKAPATRLSKPPPPSKKAESSGSSESSSESDS
ETPPVPISQKRLSTPSASVRTKQNQANQPGVLPKASPGALKEKEAQNESSSSSDSEDESD
VTPSKLPALSTPKATPAAQSVCTVKPQPPKGPHQKAEQSEDSSEDSSDDSDSEEDGAATQ
KPAQVTGQPATSPVKSMTAKNAGLTSSKPQPAGKAGTTSTKPGTVPVSKASESSESSSSD
SSDGKEAEKSAKQPPIHPFFKLVAGKVAVSSGKSVQANLSTSSAVSDKPQGSATKATGKK
EQIPSSKVKLSQGQALTAKPSGITVPESSSDSSEEEEEEASTTAKPPTQPATQQKQEAKK
ESESSSEESSDDEQEASQSLLTASPLVSKQGSVSAQAKSSGMPAPADRASSTDSSSSDSD
DGETLTAKKEITSLPSSGKEATAAKGKEAKKQGLKSTSSKKAAAKAQSNGQAQETSAVQL
PESLAALFKAPLGNKEKDTEQGNPEGTQAKSKTSKNVKKEKPSKKRKLTDGDTGPSKGKK
RKMQSAEELKLKKKKKKAKSSDSIKSTKKKDSKEKKSDKKKKKSKNVERLDADGSQKKKK
KKKKTDSLPEEA
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaactccgcgagagcagaaagagctgctggctctgatacaccagcagctggtc
cagatgggttatgtgagcgcagccaaggagttgctggagcagagcggccagaagtctttg
ccatcatctcatgtttctttgaaagagatcatcactcagtggaaacagacttactcacaa
attccaaaacaaaaggccatagaaaccaagagaggcactccaggaaagctcagaattcct
gaccccaagagcagctctgagagctcagaggaggaagaagcaacacaaaccataaaaact
aatctgcgtgggaataacagcaccaagccaacagtagctaaagaaaagagtagcagcgaa
gattcatcttcagattcatcttcagaagaggaagcagttgccaagaagactgagaaaacc
cctgtggctggaaaaaaacctgaattactgaaattggctgttcaaaatactaattctgtc
ccaggaaagggggtgactgttgctgctgcccaagcaaaaggagagcagaacaaatctgtt
tcaaatagggccttgcctcctgctgcgagaaaagcagggccaaataaagccctttctagt
aaagcagggactccttcacagtccttgatttcaggaggacaaaaaacaacacagaccaca
aagacagcagagagctctgaaagcagcagcagcacctcatctgagagtgaggaagaaaca
actttgaccacagtaaaagccccaccttccaaaccaactttaaagagggcgaggagcaca
agcaaaggctcgagtgatgattctgactctgaggacgagacaaaagcaccaacagtccag
attaaaacagctgtgaaaaattccccaatcactagtccactgctgagcaagtcaccagtc
actcctggcacttgtgcaagaaatactgtaaaggtaaccgcagcaaagccagccagtgca
aaatctggaaatgcaaacagaagcccagaatcaacagacacttcagaaactgactcatca
gctagtgagactaaagcacctgcttcagcatcacaggcctccaaagcaccagggaaaaat
gcagcatcaagtccatcaaagaaggcagtttctgcttctattccatcaaaatccactccg
aaggccactgcaacccacttatcaaaaccaccacctccttcaaaagaagccgagagctca
ggcagtagtgaatcatcatctgagagtgacagtgagactccgccagttcccataagtcag
aaggcctccacagcaccagggaaaaatgcagcatcaagtccatcaaagaaggcagtttct
gcttctattccatcaaaatccactccgaaggcccctgcaacccgcttatcaaaaccacca
cctccttcaaaaaaagccgagagctcaggcagcagcgaatcatcatctgagagtgacagt
gagactccgccagttcccataagtcagaagagattgtcaactccaagcgcttctgtgagg
accaaacaaaatcaggccaatcagcctggggtcctacccaaagcttcaccaggtgctttg
aaggagaaggaagcacagaatgaaagcagcagttcctctgacagtgaggatgaatctgac
gttacaccaagcaaattgccagcactatctacccccaaagcaactcctgcagctcaaagt
gtatgtacagtgaagcctcagcctccaaagggaccacatcagaaagccgagcagagtgaa
gatagcagtgaagattcaagtgatgactctgactcggaggaagatggagcggccactcag
aaaccagctcaggtaacaggtcaacctgctaccagtcctgtgaaaagcatgacagccaag
aatgcagggctcacatcaagcaaacctcagccagcaggaaaagcgggaacaacctcaaca
aaaccaggaactgtccctgtttcaaaagcttctgagagctcggagagcagcagctctgat
tcttcagatggcaaagaagctgagaagtcagcaaagcagcctcctattcacccttttttt
aaactggtggctggcaaagtagccgtttcttcaggaaagagtgtacaggctaacttaagt
acatctagtgctgtttccgacaaaccccagggatctgccacaaaagcaacagggaagaaa
gaacaaatcccctcctcaaaggttaaactgagccagggacaggctctgactgctaagccc
tctggaatcaccgtacctgagagctcctcagacagcagtgaagaagaagaagaagaagct
tcgacaacagccaagcctccgacacagcctgccacccagcagaaacaagaggcaaaaaaa
gaatcagagagctcatctgaggagtccagtgatgacgaacaagaagcttctcagtctctc
ttaacagcaagccctctggtctccaaacagggttctgtcagtgctcaagcaaagtcatct
gggatgccagctcctgctgacagagcatcatcaactgacagctcttcaagtgatagcgac
gatggggaaactctcacagcaaaaaaagagatcacttcgttgccttcttctggaaaggaa
gcaacagctgctaagggaaaggaggcaaagaaacagggcctgaagagcaccagctccaag
aaagctgcagcaaaggctcagagcaatggccaagcccaagagacctctgccgtacagttg
ccagaatcacttgccgcattgttcaaagctccccttgggaacaaagaaaaggacacggaa
caaggaaacccagaaggtacccaggcaaagtccaagacctcgaaaaatgtaaagaaagag
aagccatccaagaaacggaaactgacagatggggatactggcccttcaaagggcaagaag
cgaaaaatgcagagcgcggaagagttaaagttaaaaaagaagaaaaagaaagccaagtct
tcagacagcatcaaatcaacaaagaaaaaagacagcaaagaaaagaagtctgataaaaag
aaaaagaagagcaaaaatgtggagagacttgatgcagatgggtcacagaagaaaaagaag
aaaaagaagaaaacggatagccttccagaagaggcatga
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