Thamnophis sirtalis (common garter snake): 106556912
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Entry
106556912 CDS
T06107
Symbol
DCAF4
Name
(RefSeq) DDB1- and CUL4-associated factor 4
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106556912 (DCAF4)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106556912 (DCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_DCAF4
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
ASA1
Beta-prop_IFT122_1st
WD40_Prp19
WDR55
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40
Beta-prop_EML_2
EIF3I
DSE1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_VPS8
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
106556912
NCBI-ProteinID:
XP_013931426
UniProt:
A0A6I9Z665
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MKRNRWRGRRNHVQHNHRRLCNGQPYTVFHHRHSTERPEQRELQSLQNSGRGQAESSSAS
SHSCQSSSVPELPGFYYDPEKNRYFRLLPGHNNCNPLTKESIHQKEMERQRLKLLKEDEK
IIKKTPRSGLNSSIILRKKQLGFYSSITYCRLIHELKVNCMQRRKLEIENLNSSLLLSGS
NNFKLIVADTTSERIIAVNDTEREGCKYGIVNLRGLGKNSLTVETYDNPCFTNCKVNSVC
WASLRHQDSHVLLCLMGAAENLGCASLLPASFFSSSNTAVERGMSWRFNISTAWSCAWCH
NPQANNCFSTGLNQRIIVTNAVTGHHQTFNTNSDVLAQQFATQSPVLYNGCRSGEIFSID
VRQCNHKGQKWKAGQFFHDSAVTSVNLLKSEQYLMAADMLGQIKLWDLRKLKCVKEYSGH
KNEHTILPLHINEEEGLLSAVGQDCYTRIWSLQDAHLLRTIPSPSPSSRDSIPSVVFSSQ
LGGARGVPGLLMAVRQDLYYFSYKTDDPYCLDIKDMECSTLHSD
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaatcgatggcgaggtagaagaaatcatgtacagcataatcatagacggcta
tgtaatgggcagccttacacggtattccaccatcggcattctactgaaaggcctgaacaa
agagaattgcaaagcttgcagaactcaggtagaggccaagctgaatcatcatctgcatct
tcccattcatgccaaagttcttcagttccagaattaccaggattttattatgatcctgaa
aagaatcgctattttcgcttacttcctgggcataacaactgcaatcctctcaccaaggag
agtattcatcagaaagagatggaaaggcaaaggttaaaacttttaaaagaggatgagaaa
ataataaagaaaacacccagatctgggctaaactcttcaattatcttacgcaagaaacaa
ttgggtttctatagttctatcacttattgcaggctgattcatgaattaaaggtgaattgc
atgcagagaaggaaattagaaattgagaacctcaattcttcattgttgctttctggaagc
aacaattttaaactaattgtggcagacactacctccgagagaataatcgctgtaaatgat
acagaacgagaaggatgtaaatatggaattgtcaacctccgtggtttgggaaagaattct
cttaccgtagagacgtatgataacccctgcttcacaaattgcaaggtgaattctgtatgc
tgggcctctttgagacatcaggattctcatgttttgttgtgcctcatgggtgctgcagaa
aatctagggtgtgccagtctgcttccagcttccttcttcagcagctctaacacagcagtt
gaacgtggaatgtcatggaggtttaacatctccacagcctggtcttgtgcctggtgtcat
aatcctcaggctaataactgctttagcacaggtttaaatcaacgaatcattgttactaat
gcagtgactgggcatcatcaaacatttaacaccaacagtgatgttctagcacagcaattt
gccactcagtctcccgttttatataatggttgtcgttcaggggagattttcagtattgat
gtccgtcaatgcaaccataaagggcaaaaatggaaagctggccaatttttccatgactca
gcagtcacctctgttaatctcctgaaaagtgagcagtatctcatggctgcagatatgttg
ggccagataaagctctgggacctgaggaaactaaaatgtgtaaaagaatatagtggtcat
aaaaatgagcatactattcttcctttgcacatcaatgaggaggaagggcttctttcagca
gtgggtcaagactgttatacgcgaatttggagtctccaggatgctcatttgctacgaact
atcccatctccatccccatcctccagagattctattccaagtgtggtgttctcctcacag
cttggaggtgctcgaggtgttcctggcttgcttatggcagtcagacaagatctctattat
ttctcctataagacagatgatccatattgcctggatattaaagacatggaatgttccacc
ttgcatagtgactga
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