Thamnophis sirtalis (common garter snake): 106556916
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Entry
106556916 CDS
T06107
Symbol
PSEN1
Name
(RefSeq) presenilin-1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04310
Wnt signaling pathway
tsr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106556916 (PSEN1)
04330 Notch signaling pathway
106556916 (PSEN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsr01002
]
106556916 (PSEN1)
Peptidases and inhibitors [BR:
tsr01002
]
Aspartic peptidases
Family A22: presenilin family
106556916 (PSEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
106556916
NCBI-ProteinID:
XP_013931429
UniProt:
A0A6I9Z5E2
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MASEVEESIPLLLLKNVNNERRQQESGDRGANNPTPATNGQPQQRPRQVVEPDEEEEEEL
TLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTRKDGQLIYTPFTEDTETVGQRALNSV
LNAAIMISVIVVMTVLLVVLYKYRCYKVIHGWLIVSSLFLLFFFSFIYLGEVFKTYNVAM
DYITVALMIWNFGVVGMICVHWKGPLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVI
SVYDLIAVLSPKGPLRMLVETAQERNETLFPALIYSSTMIWLVNMAEQDPEAQKGASKNA
TYNQQVTVNQNQNAGPEVDDGGFNPEWEQQRDSRIGPLQSTRETRAAVQALPTNSLASED
PEERGVKLGLGDFIFYSVLVGKASATASGDWNTTLACFVAILIGLCLTLLLLAIFKKALP
ALPISITFGLVFYFATDNLVQPFMDELAFHQFYI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaagttgaagaatctattcctttgcttctgctaaagaatgtcaacaacgaa
agacgacaacaggagagcggtgaccggggagctaataatcctactccagcaactaatgga
cagccacagcaaaggcctcgacaagtggtggagccagacgaggaggaagaggaagagttg
acactgaaatatggggccaagcacgtgatcatgctctttgtgcctgtcacattatgtatg
gtagttgtggttgcgactatcaagtctgtcagtttctatacgcgcaaggatgggcagcta
atctatactccatttacagaagatacagaaactgttggacaaagagctctgaattctgta
ctcaatgctgccatcatgattagtgtcattgttgtcatgactgtactcctggttgtgctt
tataagtataggtgctataaggtgatccacggctggctcattgtttcttctctctttttg
cttttctttttctcatttatttacttaggggaggtttttaagacctataacgttgccatg
gattatattactgtagccctcatgatttggaactttggggtcgtcggaatgatctgcgtt
cactggaaaggccccctccgtcttcaacaagcctacctcattatgataagtgctctaatg
gccttggtgtttataaagtatcttcctgagtggactgcttggctcatcttggcagtaatc
tcggtgtatgatctgattgcagtattgtctcccaaagggcctcttcgtatgctagtagaa
acagctcaagaaagaaatgaaactttgttcccagcactcatttactcatcaacaatgata
tggctagtaaatatggctgaacaagatcctgaggcccagaagggagcgtctaaaaatgcc
acttacaatcagcaagttacagtgaatcaaaaccagaatgcaggtcctgaggtagatgat
ggaggtttcaacccagaatgggagcagcaacgagacagcaggattgggcccctgcagtca
acccgtgaaacacgagcagcagtgcaggctcttcccactaattccctagcaagcgaggat
ccagaagagagaggagttaagcttggcttaggagatttcattttctacagtgttctagtt
ggcaaagcttcagcaacagccagtggagactggaacacaactttagcctgttttgtagcc
attttaattggcctgtgccttaccctgttgctacttgccatttttaaaaaggccttacca
gctcttccaatttctatcacatttgggctagttttctattttgccacggataacttggtg
cagccttttatggacgaattagctttccatcaattttatatctag
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