Thamnophis sirtalis (common garter snake): 106557040
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Entry
106557040 CDS
T06107
Symbol
HCFC2
Name
(RefSeq) host cell factor 2
KO
K27390
host cell factor 2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106557040 (HCFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106557040 (HCFC2)
03029 Mitochondrial biogenesis [BR:
tsr03029
]
106557040 (HCFC2)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
106557040 (HCFC2)
Mitochondrial biogenesis [BR:
tsr03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
106557040 (HCFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Beta-prop_TYW4
NANM
Kelch_FKB95
DUF6242_C
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
106557040
NCBI-ProteinID:
XP_013931625
UniProt:
A0A6I9Z719
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MAAGAAALNWRRVSSFTGPVPRSRHGHRAVAIRELVIIFGGGNEGIADELHVYNTATNQW
FLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNDLYELQASRWLWKKMRPQPPS
AGLPPCPRLGHSFCLYGNKCYLFGGLANESEDSNNNIPRYLNDFYELELQHGSGVIGWSV
PLTRGVLPSPRESHTAVIYCKKDLGNPKMFMFGGMSGCRLNDLWELDIETMTWSKPETKG
TVPLPRSLHTASVIGNKMYIFGGWIPQSTDESLPAQDGEWKCTGSFSYLNLDTLEWINLI
PDCQEDKNNVLPGPRAGHCTVIVGSRLYIWSGRDGYRKAWNNQVCCKDLWYLDTEKPPAP
SQVQLIRATTNSFQVKWDEVPTVEGYLLQLHLDVPTPVATDVSFTVTPEPQSSCVQGTKL
DLHPKTLSASSNVQISISEAKAKIPETENTKKNHSVSKESNVPLCLPASTLVKESPVPST
RATVVNPLDSAVQSPKTSPPKQNSRVRTQERKWNDVGIFQSNTALVSQFYLLQEEKIFSS
KKGDNTDIPNASLFKKQDLAPGTLYRFRVAAINGCGVGPFSKISEFKTCIPGFPGAPSIV
KISKSADCIHLSWEPPVSPSGNILEYSAYLAIRTTQLHENPNQLMFMKIYCGLKTSCTVT
AAQLANAHVDHTSKPAIVFRISAKNERGYGPATQVRWLQEMKTSSSK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggcgccgctgccctgaattggaggcgcgtttcttctttcacggggccggtc
ccccgatcccgccatggccatcgcgccgtggcgatccgcgagctggtcatcatcttcggg
ggcggcaacgaaggcatcgccgatgagctgcatgtatacaataccgccacaaaccaatgg
ttccttcctgctgtcagaggagatattccaccagggtgtgcagcccatggatttgtctgt
gatggtaccagaatattagtgtttggaggaatggttgaatatggaagatatagtaatgat
ttgtatgaactgcaggcaagtcgatggctgtggaagaaaatgagaccccagcccccttca
gcaggtttgcctccatgccctcgccttggccatagcttctgtctatatggcaacaagtgt
tacttatttggtggactggcaaatgagagtgaagactcaaacaataacattccaagatat
ttaaacgatttctatgaattggagctacagcatggatcaggagtcataggctggagcgtt
ccattgaccaggggagttttgccgtctcccagagaatcccacacagctgttatatactgt
aaaaaagacttgggaaatccaaaaatgtttatgtttggaggaatgtctggttgccggctg
aatgacctttgggagcttgatatagagacaatgacttggtcgaaaccagaaactaaaggg
acagtgccacttccccgtagtctccatacagccagtgtaataggaaacaaaatgtacatt
tttggtggatggatcccacagagtacagatgagagcctccctgctcaagatggggaatgg
aaatgtactggttcattttcatacttaaatttagatactttagaatggataaatctaatc
ccagattgtcaagaagacaaaaacaatgtgttaccaggtccaagagctggccactgcaca
gtcattgttggctctcgcttgtatatatggagtggcagagacggctacaggaaagcttgg
aacaatcaagtttgctgcaaagatctttggtatctagatacagagaaaccaccagcacca
tcgcaggtacagttgatcagagctacaactaattcatttcaagttaaatgggacgaagtt
cctactgttgaaggataccttcttcaactacatttagatgtgcccacaccggttgcaact
gacgtatcctttactgtgacacctgagccacagtcatcctgtgtgcaaggaactaaactg
gatctccaccccaaaactctcagtgcctcaagcaatgtgcaaatttccatttcagaggct
aaggccaagattccagaaactgaaaatacgaagaaaaaccattccgtttccaaagagtcc
aatgtccctttatgtttgcctgctagcactttagttaaagagtctccagtgccctcaact
agagccacagttgttaaccctcttgattcagctgttcaatcacctaaaacttcaccacca
aagcagaattcaagagtgaggacacaagaacgaaagtggaatgatgttgggatttttcaa
agcaacacggcattagtgagccagttttatttgctgcaagaagaaaagattttttccagc
aagaagggagacaatacagatattccaaatgccagtttatttaagaaacaggatctcgct
cctggcactttatacaggttcagggttgctgcaattaatggatgcggtgtagggcctttc
agcaaaatcagtgaatttaagacttgcatccctggatttcccggagcaccttcaattgtc
aaaattagcaagagtgcagactgtattcatctttcatgggagcctccagtttccccttcg
ggaaatatcttggaatattccgcttatttggcaataagaaccactcagcttcatgaaaat
cctaatcaactgatgttcatgaaaatctattgtggccttaagacctcatgtacagtgact
gctgcccaacttgcaaatgctcacgttgatcatacatccaagccggccattgtgttcagg
atttcggccaagaatgagaggggatacggacctgccacacaggttcgatggctccaagaa
atgaaaacatcaagttcaaagtag
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