Thamnophis sirtalis (common garter snake): 106557164
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Entry
106557164 CDS
T06107
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04068
FoxO signaling pathway
tsr04110
Cell cycle
tsr04120
Ubiquitin mediated proteolysis
tsr04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106557164 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
106557164 (SKP2)
04150 mTOR signaling pathway
106557164 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106557164 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106557164 (SKP2)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106557164 (SKP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_4
LRR_8
F-box_5
Motif
Other DBs
NCBI-GeneID:
106557164
NCBI-ProteinID:
XP_013931798
UniProt:
A0A6I9Z3X6
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MGVSALKLDSENTPQDLLMCVSPPTKRQKVRETKFVIIRQPRLLQETVTGISWDTLPDEL
LLGIFSCLNLTDLLKVSQVCRRWHRLSLDESLWQSLDLAGKNLLPGVIGQLLPLGVIAFR
CPRSCIATPLFKTSRALCVQHLDLSNCTINVIDLVAILDRCQSLQNLSLEGLLLSSGIVR
SIAQNPNLVRLNLSGCSGFSADTVEVLLKSCLRLEELNLGWCDFTAEHLKIVVSHVPPKL
LQLNLSGYRQNLLIPDVKTLLERCSGLVHLDLSDSVMLKPECFAYFHQLRHLEHLSLSRC
YQIPPAALLELGEIATLKTLQVFGIVTANSLQLLKGTLPHIKINTSYFSPIARPTIGCKK
NQEIWGIQCRLNLRNLAGV
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgtctgctcttaaattggacagtgagaacaccccccaggatctcttgatgtgt
gtgagtccacccacgaaacggcagaaagtgagggaaaccaaatttgtgattatccgccag
cctagactgcttcaagagacagttacaggtatttcttgggatactttgccagatgaattg
ctgttgggaatcttttcctgtctaaacttgactgatttactgaaagtttcccaggtttgc
cggagatggcatcgcctttcgcttgatgagtcgctttggcaaagtcttgatcttgcaggt
aaaaatcttttgccaggagtgattggccaattgttgcccttgggagtgatcgctttccgc
tgtccaaggtcctgcatcgcgacacctttgtttaaaacaagcagggctctttgtgtgcaa
catctggatttatcgaattgtacaataaatgttatagatctcgtagctatccttgacaga
tgccagagtctgcagaacctcagcttagaaggtctcctactttcttctggtatagttaga
agtatagcacaaaaccccaacttggtccggctcaacttatctggatgttctggattctct
gcagataccgtggaagtgttgttgaaaagctgtctgaggttagaagaattgaatttaggc
tggtgtgacttcacagctgagcatttgaagatagtagtcagtcatgttcctcccaaacta
ttgcaactgaaccttagtggatacaggcagaatctcctgatcccagatgttaaaacatta
ctagagagatgctctggtctagtacatttagatttaagtgacagtgttatgttgaagcct
gaatgctttgcctacttccaccaactcagacaccttgagcacttaagtcttagtcgatgc
tatcaaatacctcccgctgctttacttgaacttggtgaaattgctacactcaaaacactg
caagtttttggaatagtgactgccaattccctacagctcttaaaagggacgcttcctcat
ataaagatcaatacctcctatttttcacctatcgcaaggcccaccattggctgcaaaaag
aaccaagagatttggggaatccagtgcagactgaacttgagaaatctggctggggtttaa
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integrated database retrieval system
