Thamnophis sirtalis (common garter snake): 106557175
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Entry
106557175 CDS
T06107
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
106557175 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
106557175 (SNX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PXA
Nexin_C
RGS
PX
Rep3_C
Motif
Other DBs
NCBI-GeneID:
106557175
NCBI-ProteinID:
XP_013931816
UniProt:
A0A6I9Z7G5
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MMLAETNLSIWGWGSLVVLLFLITFGPFAIFYFAFYILCSVGGGFVVTLLFGKTNSEKYL
EQCEHSFLPPISFGINKCIEEMKEESKPIKIDRRLTGAYIIDEPLQQIIQFSLRDYVQYW
YYTLSDDESFLLEIRQTLQNALIQFSSRTKEIDWQPYFTTRIVDDFTTHLRVFRKAQQRI
SERDEQIKDGAEDLVDTFFEVEVEMEETICRDLVCTSPKDEEGFLRDLCEVLLYLLLPPG
DFQNKIMRYFVREILSQGILLPLINQLSDPDYINQHFIWMIRDSICNYEAFMNIVKVSDK
IGELEAVRDKATEELQYLRSLDTAGDDINHIKNQINSLLFVKKVCDSRILRLQSGKEIDT
VKLAANFGKLCTVPLDNILVNNVALQFFMDYMQQMGGQAHLFFWITVEGYRVTAQKQLEV
LLNHQKDGMHQTTQTKGLLRTAAVGIYDQYLSEKASPRINIDDPLVAKLEEKLNNEDPTP
EIFDQIQRKVYELMLQDERFYPSFKQHTLYVRMLAELDMLKDPSFRGSDDGEGESFNGSP
TGSINLSLDDLSNVSADELIQLHACISDTVYADYDPYTMAGVCNDHGRTYALYTITVQRR
TVTANDEWKTYRRYSDFHDFHMRIIEQFENLGNLLKLPGKKTFNNMDRDFLEKRKKDLNS
YLQLLLTPEVMKAYPTLAHYVYDFLENKAYNKEKGDFARKVDTFVNPLRNSMRNVSNAVK
SIPDSFTEGMTKMSDNMGKISERLGQDIKQSFFKEPPLMQKTYVDPKHCRVAAHLDDNVE
DNVPLKIMLLLMDEIFDLKERNQWLRRNIKNLLQQLIRAMHGYTINKKIVDHVDWMTSPE
QVADAVKRFRDAFWPNGILAETVPHRDHSIRMRTRIAAKTKLLGVMPDELKHILGAETTR
KGILRVFEMFQHTQLNKRMVYVFLEGFLETLFSEYGFHDLFKKLHSRSKQMQVYKHKLQS
TQSSYLQKR
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgatgttagctgagaccaatctttccatatggggatggggaagccttgttgttctgctt
tttctaattacatttggaccatttgctatattttacttcgcattttatattctctgctct
gtgggtgggggctttgtggtaacactcttgtttggaaaaactaattctgagaagtacctc
gaacagtgtgaacactcctttcttcctccaatctcatttggcattaataagtgcatagaa
gaaatgaaagaagaaagcaaacctattaagattgataggaggttaactggtgcctatata
attgatgaacctctgcagcaaatcattcaattttccttgcgtgactatgtccagtattgg
tattatacactaagtgatgatgaatcttttcttcttgaaatcaggcagactctccaaaat
gcactaattcagttttcttctaggacaaaagaaatagattggcaaccttattttactact
cgaattgtagatgactttactactcatcttagagtattcagaaaagctcagcaaagaata
tctgaaagagatgaacaaattaaagatggagcagaagatcttgtagatacattttttgaa
gttgaagttgaaatggaagagaccatctgtcgtgatctggtctgcacatctcccaaagat
gaagaaggattcctaagggatctgtgtgaagttttactgtatttattgctacctcccggg
gacttccagaacaagatcatgagatattttgtcagggaaatcctttctcaaggaattctt
cttccattaataaatcagctcagtgatcctgattatattaatcagcatttcatatggatg
attcgtgattcaatttgcaattatgaggcctttatgaacattgttaaagtaagtgataaa
ataggagagttagaagcagtaagagacaaagccacagaagaactgcagtatcttcgttct
ttggatacagctggagatgatattaaccatataaaaaatcagataaatagcttactattt
gttaagaaagtatgtgattcaagaatactgaggctacagtcaggaaaagaaatagatact
gtgaaactggctgcaaattttggaaaactttgcacagtccctctggacaacattctagta
aacaatgttgcactacagttttttatggattacatgcagcagatgggaggtcaagcacat
ctttttttctggataacagtagaaggatacagggttacagctcagaaacagctggaagta
ttgctgaaccatcagaaggatggaatgcatcaaacaacacaaaccaaaggtctattaaga
acagctgcagttggaatatatgatcagtatttatcagaaaaggcttctccaagaattaat
atcgatgatccattggtagcaaagctggaagaaaagttgaataatgaggacccaactcct
gaaatttttgatcagattcaaagaaaggtatatgaattgatgctgcaagacgaaaggttc
tatccttcattcaagcagcatacactttatgtacgaatgcttgctgagctagatatgcta
aaggatcctagtttcagaggatcagatgatggtgaaggggaatcatttaatggatcccct
acaggcagcattaatttgtcactggatgatctttcaaatgtgtctgctgatgagttgata
cagctacatgcatgcatttcagatactgtctatgctgattatgacccatatactatggca
ggagtttgtaatgaccatgggaggacatatgcattatatactataactgttcaacgtcga
actgtgactgctaatgatgaatggaaaacatatcgtcgctacagtgatttccatgacttc
catatgagaattattgaacagtttgaaaacctaggaaatttattgaagcttcctggtaaa
aaaacattcaacaatatggatagagatttcttagaaaaaaggaaaaaagatttaaattca
tacttacagcttttgttaacacccgaagtgatgaaagcttatccgactttagcacactat
gtgtatgatttcttggaaaacaaggcatacaataaagagaaaggagattttgctcggaag
gtggacacatttgtaaatccactgcgtaactctatgagaaatgtttcaaatgctgtcaag
tccatccctgacagcttcacagaggggatgacaaaaatgtcagacaacatgggcaaaata
tcagaaagattgggacaagatataaagcaatcatttttcaaggaacctcctttaatgcag
aagacatatgttgatcctaaacattgtcgagttgcagcacatctagatgataatgtagaa
gacaatgtacctcttaaaataatgctgctactcatggatgaaatattcgatctgaaggag
agaaatcagtggctacgacggaatatcaaaaatttgcttcagcagcttattagagcaatg
catggatatacaataaataaaaaaatagttgatcatgttgattggatgacatctcctgaa
caagtagcagatgcagttaaacggtttagagatgccttttggccaaatggcattttagct
gaaactgttccacacagagatcattcaatcagaatgcgaacacgaattgctgcaaaaaca
aaactgctgggagtaatgcctgatgagctgaagcatatccttggtgctgagacaacaaga
aaaggcattctccgagtctttgaaatgttccagcatactcagctaaataagagaatggta
tatgttttcctggaaggcttcttggaaactttattttcagagtatggattccatgatctc
ttcaaaaaattgcattcacgttcaaaacagatgcaggtatataaacataaactacaatct
acacaatcatcttatttacagaaaaggtga
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