Thamnophis sirtalis (common garter snake): 106557208
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Entry
106557208 CDS
T06107
Symbol
SEC24D
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106557208 (SEC24D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106557208 (SEC24D)
Membrane trafficking [BR:
tsr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106557208 (SEC24D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
106557208
NCBI-ProteinID:
XP_013931853
UniProt:
A0A6I9Z426
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MNHQGYVAAPPYSQAQPGMGGFSSGFGQTVSSPLHGHYNDPNPAPFTSQSGILKTNVPFG
VPSVMGSPPQSLHPPKQSNFQNGPSTAAAQQLHRLPGPPASYPSYHHSLQSGPNNPPLPA
VQLTNQLGNMQISSYGPSNAQNPPSYGPSGQPSCLQGPPLQPHQMALPTSPPVSPPNNLH
SHCAPPLPPSMARQEGIPGPNPLNTNLPQQFAGEPPGPGFPSQYGNYGPPMAGGQLSYPG
GLPSGPAQLAGPQQRKLDPDSIPSPIQVIENDKVSRGGQTYATNIRGQVPPLVTTDCLIQ
DQGNSSPRYIRCTSYCFPSTSDLAKQAQIPLAAIIKPFANIPANETPLYLVNHGENGPIR
CNRCKAYMCPFMQFIEGGRKYQCGFCNCVNDVPPFYFQHLDHIGRRIDHYERPELSLGSY
EYVATLDYCKNNKPPQPPAYIFMIDVSYNNIKSGLVKLICEELKTVLNRLPKEEQDVSTI
RVGFVTYNKILHFFNVKSTLAQPQMMVVTDVSEVFVPLLDGFLVNFQESQSVINNLLDQI
PEMFGDTNESETVFAPVIQAGMEALKAAECAGKLFIFHSSLPTAEAPGKLKNRDDRKLVN
TEKEKTLFQAQTNIYEALAKDCVASGCCVNLFLFPNQYADIASMGFVTFHTGGTLYKYNN
FQIQSDSHQFLNDLRKDIEKKVGFDAIMRVRTSTGFRATDFLGAIYMNNTTDVELAAIDC
DKAVTVEFKHDDKLSEDGGALIQCAVLYTAMTGQRRLRVHNIGLSCSSQLADIYKSCETD
ALVNFFAKSAYKAILSQPLKTVREILVNQTARMLACYRKNCASPSAVSQLILPDSMKVLP
VYINSLLKSCVLLGKSEIPTDERTFHRQLVMSMDVASTQLLFYPQLLPIHSMDVSKDTIP
HAVRCSEERLCEGGVFLLANSLHMFLWLGVSAPPDLIQGIFNVPSFAHVNTEASRLPELD
NPYSSNLRSIIDQLQSRTPYSMKILIVKQREQTEMVFKQFLIEDKNIYGGTSYMDFLCCV
HKEICQLLN
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaccaaggatatgttgcagcacctccatattcccaggcccagccaggaatggga
ggattttcttctggctttggacaaacagtttcttcacctctgcatggacattataatgat
ccaaatccagcaccttttacatctcagtcaggtatattgaaaacaaatgtgccttttgga
gttccttcggtcatgggatctccacctcagagcctccacccacctaagcagagtaatttc
cagaatggacccagcactgcagcagctcaacagctacacagattgccaggtcccccagct
tcttatccttcctaccatcattctttacagtctggtcctaacaacccccctctgcctgca
gtacagctgacaaatcagcttggtaacatgcagataagtagttatggtcccagtaatgct
cagaatccaccttcgtatggaccttcgggccaaccatcatgtttgcaaggtccacctctt
cagccacatcaaatggctttgccaacaagtcctcctgtttctccaccaaataacttgcat
agtcactgcgctccacctttaccgccttcaatggccaggcaggaggggatccctggccca
aatccattgaacaccaacttgccacagcaatttgcaggggaacccccaggtcctgggttt
ccttctcagtatggaaattatggtcctccaatggcagggggacaactgtcttatccaggt
ggtcttccctcaggtccagcacaattagctggaccacagcaaagaaaacttgatccagat
tccattccaagtccaattcaagtaattgaaaatgataaagtttccagaggaggtcagacc
tatgctaccaatatcagaggtcaagttcctcctcttgttacaaccgattgcctgatccaa
gatcaaggtaattccagtcctcgttatattcgatgtacctcttattgctttccttcaact
tcagacctagcaaaacaggctcaaattccattagctgctatcatcaagccttttgccaat
attccagcaaatgagactccactttatttggtaaaccatggggaaaatggaccaattcga
tgcaatcgatgcaaagcttacatgtgtcctttcatgcagttcattgagggaggaagaaaa
tatcagtgtggattttgtaactgtgtgaatgatgttcctccattttattttcaacatctg
gatcacattggtagaagaatagatcactatgaaagaccagagctatcacttggatcatat
gagtatgttgctactttagattattgcaagaacaacaagcctcctcagccaccagcctat
atttttatgattgatgtgtcttacaataacataaaaagtggtcttgttaaactgatttgt
gaagaactaaaaactgtactgaacagacttccaaaagaggagcaagacgtttcgacaatt
cgggttggatttgtcacttacaataaaatccttcacttcttcaatgtaaaaagtactctt
gcacaacctcaaatgatggtagtcactgacgtcagtgaagtattcgtacctttgttggat
ggcttccttgtcaacttccaagaatcacaatctgttataaataacttgctggaccagatt
cctgagatgtttggagatacaaatgagagtgagacagtctttgctcctgtgattcaagca
ggcatggaagcactcaaggcagcagagtgcgctggaaaactgtttatcttccactcttca
ttgccaactgcagaggcaccagggaaactgaagaacagagatgataggaaattggtcaat
acagagaaagagaagacgctgtttcaggcccagacaaatatttatgaggccttggccaaa
gactgtgttgccagcggttgctgtgtaaatctgtttcttttcccaaaccagtatgcagat
atcgcttctatgggctttgtgacttttcatactggaggaacattgtacaagtacaataat
tttcagatacagtctgacagccatcaatttctcaatgacctgagaaaggatatagaaaaa
aaagtgggttttgatgctattatgagagttcgaactagcacaggttttagagcaacagac
ttccttggagctatttacatgaacaataccacagatgttgaactggcagcaatagattgt
gacaaagctgtgactgtggagttcaagcatgatgataaattgagtgaagatggtggggct
ttaatccagtgtgcagttctttacacagccatgactggtcaaagaagactgcgcgtacat
aacattggactcagctgtagttcccagttggctgatatctacaagagctgtgagactgat
gcactagtaaatttttttgcaaaatcagcttataaagccattctcagccagcccttaaag
actgttcgtgagatcctggtgaatcaaacagctcgcatgttggcatgttacagaaagaac
tgtgctagtccatctgcagtgagccagcttattcttcctgattcaatgaaggtacttcct
gtctacataaatagccttctgaaaagctgtgtgctgttgggcaagtcagagattcccacg
gatgaaagaacttttcatagacagctggtcatgtcgatggatgttgctagcacccaactt
ttattctacccacagcttctgccaattcattccatggatgtaagtaaagacacaattcct
catgctgttcgctgctcagaagaacgtctctgtgaaggaggagtattcctattggcaaat
tctctacatatgtttctatggcttggagtcagtgccccaccagatcttatccaagggata
tttaatgtgccttcctttgcgcatgtcaacactgaggcttcacgtcttccagaactggat
aatccctactcttcaaacctgaggtccataatagatcagctccaaagcagaacaccctat
tccatgaagattctgattgtgaagcaacgagagcaaacggagatggttttcaagcagttt
ttgattgaagacaagaacatctacggaggaacttcttatatggacttcttatgttgcgtt
cataaagaaatatgtcagcttctcaactaa
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integrated database retrieval system
