Thamnophis sirtalis (common garter snake): 106557225
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Entry
106557225 CDS
T06107
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
106557225 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106557225 (XRCC5)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
106557225 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
VWA_2
VWA
PDDEXK_7
CttA_N
Motif
Other DBs
NCBI-GeneID:
106557225
NCBI-ProteinID:
XP_013931879
UniProt:
A0A6I9Z6W5
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MAVVLCMDVGFSMNNSTPGEESPFEQAKKVMTMFVQRQVFAENKDEVSLVLFGTERTSNS
LASGDQYQHITVHRHLILPDFDLLEDIQNLTSLGSEQGDILDALIVSMDLLQKETIGKKY
DKRHIEVFTDLGTPFSEDQLDIIINNLKKTGISLQFFLPFPMNDEDRDENASAGTHNSRS
RNSFPGKGLSKQQKEGLQMVKKLMFSLDHEEGLEDIYTFRESLERLSVFKKVERRPMPWP
CQLTIGSNLSIRIVAYKTFTEENVKKSWIVVDAKTYKKEDIQKETVYCLDDDDETEVQKE
DVIQGFRYGSDIIPFSKVDEEQMKYRTDGKCFAVLGFCRSSLVQTYRYMGNQVLKVFAAK
DDEAAAVALSALINALNELDMVAIVRYVYDRRSHPQVGAAFPLIKNEYECLAYVQLPYME
DLRHYMFSSLKNNKRYTPTEDQLSAVDSLIDSMSLVCEDDSEGTVVDIFKPSKFPNPLFQ
RLYQCLQHKAFHPDAPLPPIENQLLDMLETPQKVTEKCQAPLQKVKALFPLKEESKIKEQ
KTAQSIFKDNNEDGPNAKKAKTEEGEASFRIASLSEGNVITVGSVNPAENFSLLVRKKNA
DFKEVSQQLIKHIFQFLENRGIVYYMKSIHCIKVFREDAIKLSEVQCFNDFLEALKKRVE
DKNLPDFWEIVIQEGISLITNEEAEGSSLTAEDAKKFLAPNEKPMEVSPVAEEGGDVDDL
VSILMLAEGEDVNGKDEIMLNMGYRSER
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtgctatgcatggatgttggtttctcaatgaacaattccactcctggagaa
gagtctccttttgaacaagccaagaaagtgatgacaatgtttgtgcagagacaggtattt
gctgagaataaagatgaagtttctttggttttatttggtaccgagaggacttccaatagt
cttgcaagtggggaccagtaccagcatatcactgtgcatagacacttgatacttccagat
tttgatttgttggaagatatacaaaacttgacttcactgggctctgaacaaggcgacatt
cttgatgcgctgattgtgtcgatggatttgcttcagaaagaaacaataggaaaaaaatat
gacaaacggcatattgaggtttttactgatcttgggactcccttcagtgaagatcaactg
gatattatcataaataacttgaaaaaaactggcatctcccttcaattttttttgccgttt
ccaatgaatgatgaagacagagatgagaatgcatctgccgggacgcataatagcagaagc
agaaattcttttccaggaaagggtctaagtaaacagcaaaaggaagggctccagatggtg
aaaaaactcatgttttcattagaccacgaagaaggtctggaggacatttatactttcagg
gagagtctggagcgtctttcagtgtttaagaaagttgaacggagacctatgccatggccc
tgccagcttacaattggttctaacttgtctatcaggattgtggcctacaaaacattcaca
gaggaaaatgtgaaaaaatcctggatagttgttgatgccaagacttataaaaaagaggat
atccagaaagaaacagtttattgtttagatgatgatgatgaaacagaagttcagaaagaa
gatgttattcaaggattcaggtatgggagtgacatcattcctttctctaaagtggatgag
gaacagatgaaatataggacggatgggaaatgctttgctgttttgggattctgccgatct
tctctggttcagacataccgatatatggggaaccaagtcctgaaagtcttcgcagcaaag
gatgatgaggctgctgcagttgcactttctgccctaattaatgctttaaatgagttggac
atggtggctatagtacggtatgtttatgatcggagatcgcacccacaggttggagcagcc
tttccactaattaaaaatgaatatgagtgtttggcttatgtgcaactaccctatatggaa
gatttgaggcactacatgttttcctccttaaaaaataacaaaaggtatactccaacagaa
gatcagctgtctgcagttgactccctgattgattctatgtctttggtttgtgaagatgat
agtgaagggactgtggtggatatatttaaacccagcaaattcccaaatcccctgtttcaa
agattgtaccagtgcttgcaacataaagcttttcatcctgatgcacctctaccccccatt
gaaaaccaactcttagacatgttggagaccccccagaaagtaacggaaaaatgccaggct
ccccttcagaaagtaaaagctctttttcccttgaaggaggaaagcaaaataaaagagcag
aagacagctcagtccatcttcaaagacaataatgaagatggccccaatgctaaaaaggca
aaaacagaagagggtgaagccagtttcaggattgcaagcctctctgaaggcaatgtgatt
acagttggaagtgtcaatccagcagaaaacttcagcctgctagtgaggaagaagaatgct
gacttcaaagaagttagtcagcagctgataaaacacattttccagtttttggaaaacaga
gggattgtgtattatatgaagagcatccattgcataaaagttttcagagaggacgctatt
aagctgtcagaagtgcagtgctttaatgattttttggaggcgttgaaaaaaagggtggaa
gacaaaaacttaccagatttctgggagattgtgatacaagaaggaatttcattgatcacc
aatgaagaagctgaaggaagctctctaacagctgaagatgctaaaaagtttttggctccc
aacgaaaagcccatggaagtttcaccagttgctgaagagggtggtgatgttgatgatctg
gtaagtattttaatgttggcagaaggagaggatgtaaatggcaaggatgaaatcatgcta
aatatgggatatcgctcagagagatga
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