Thamnophis sirtalis (common garter snake): 106557227
Help
Entry
106557227 CDS
T06107
Symbol
ITGB8
Name
(RefSeq) integrin beta-8
KO
K06591
integrin beta 8
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04510
Focal adhesion
tsr04512
ECM-receptor interaction
tsr04514
Cell adhesion molecules
tsr04810
Regulation of actin cytoskeleton
tsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106557227 (ITGB8)
04514 Cell adhesion molecules
106557227 (ITGB8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106557227 (ITGB8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106557227 (ITGB8)
04810 Regulation of actin cytoskeleton
106557227 (ITGB8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106557227 (ITGB8)
04515 Cell adhesion molecules [BR:
tsr04515
]
106557227 (ITGB8)
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106557227 (ITGB8)
Cell adhesion molecules [BR:
tsr04515
]
Integrins
Integrin beta subunits
106557227 (ITGB8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
PSI_integrin
EGF_2
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
106557227
NCBI-ProteinID:
XP_013931883
UniProt:
A0A6I9Z457
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MRPRSPSGSAAYYLRLGGGGSSSPCRFRHGLYRVSDSVTSFCSWTMHDLRGEQNYIMWIS
LLAFLTVGLVSLHKCQRHPGPVLGMSRLLAVIVPGSGQRPDNRCVVSNAATCTACLAVGP
ECGWCVQEDFMAGTKLKERCDIVSHLIQRGCKPDFLESPKVDVTVSSNEANIQVIPGEAS
VHLRPGSEASFMLKVRPLEKYPVDLYYLVDVSASMHRHIERLNSVGFELSQKMENISIDL
QLGFGSYVDKTVSPYISIHPKRIHNQCSDYELDCMPPHGFIHVLSLTDKISEFRSVINKQ
KISGNIDTPEGGFDAMLQAVVCQSHIGWRKEAKRLLLMMTDQTSHLALDSKLAGIVIPND
GKCHLKENVYIKANSMEYPSLGQLSEKLIDNNINVIFAVQGSQYHWYKDLLPLLPGTVAK
QIESETANLGDLVLEAYKKLLSEVKIQVDNTLKDIHVKVTAICPDGSRKMGSEGCKNVKS
STEVFFNISIAMKECDATDRRNHVMIKPLGFNESSRINIHKRCVCQCEDSGKHKKICINE
SPLDDEISTCKDGICGSSEKLSSEQCKMELDHLLCSGQGECVNGKCICYKNKYGTIYGKY
CEKDDFSCPYYLGKLCAGNGECEAGKCKCFRGWEGDRCQCALSLQKHCMNSNGQICSGRG
ICVCGKCRCADPNSLGSLCEFCPSCRKVCNDKRNCESCRHFNSSHNTLGQCKTTCNYRMH
YLERSECLSDDPSYFRIFFIIFIITFLIGLLKVCIIRQIIVYCDHSRIKSSAGYRVPAAK
KDKTFLPTVCAKTVTYRRDKPEEINIDRRQINEAFKCSS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgcgctccccttccggctccgctgcttactacctgcgtctcggtgggggtggt
agttcatccccctgtcgctttcgccacggtctctacagggttagcgactccgtgacgagc
ttctgctcctggactatgcacgacctccgaggagaacaaaactacattatgtggatctca
ctcctggctttcctaacggtcgggctcgtctcgctgcacaaatgccagcggcatcccggc
ccggtcctgggaatgagtcgccttctcgcggtgattgtgccaggctcgggacagcgccca
gacaacagatgtgtcgtatcaaatgcagcaacatgtactgcctgtcttgcggtgggtcct
gaatgtggttggtgtgttcaagaggatttcatggcaggaacaaagctgaaagaaagatgt
gacatagtttcacatttaatccaaagaggctgcaagccagatttcctagaaagtcctaag
gttgatgtaacagtgtccagcaatgaggctaacattcaagttataccaggagaagcttca
gtgcacctgcgtccaggctctgaagcaagttttatgctgaaagtccgcccactggaaaaa
tatcctgttgatctttattatttagttgatgtatctgcatctatgcacagacatatagaa
cgattaaactctgttggatttgaattatctcagaagatggaaaatatctcaattgatttg
caacttggatttggatcctatgtagataaaacagtatcaccctatattagtattcatcca
aaaagaatccataatcagtgcagtgattatgaacttgattgtatgccacctcatggtttt
attcatgttttatcattgactgacaaaatatcagaattcagaagcgtaattaataagcag
aaaatatctggaaatattgatacacccgaaggaggctttgatgctatgcttcaggcagtg
gtttgtcagagccatattggttggcgtaaagaagcaaaacggctgcttctcatgatgact
gatcagacatctcatttggctcttgacagtaaattagcagggatagtaattccaaatgat
ggaaaatgtcatttgaaagagaatgtgtatatcaaagcaaacagtatggagtacccatca
cttggccaactttctgaaaagctcatagacaacaatattaatgtaatatttgcagtccaa
ggaagccaatatcattggtataaggatcttttgcctctgctacctggaactgttgcaaaa
caaatagaatcagagacagcaaatcttggagatttggtactagaagcttacaagaagctg
ctttctgaagtgaaaattcaagtcgataacaccctcaaagatatacatgtcaaagttact
gcaatctgtcctgatggaagtagaaaaatgggttcagagggatgcaagaacgtcaaatct
tcaactgaagtattctttaatatttctattgccatgaaagaatgtgatgcaactgacaga
agaaaccatgtgatgataaaaccccttggtttcaacgaatcctctagaattaacatccat
aaaagatgtgtgtgtcaatgtgaggacagtggaaaacacaaaaaaatctgcatcaatgaa
agccctcttgatgatgaaatatccacctgcaaggatggaatatgtggttctagtgaaaaa
ttatcttcggagcaatgtaagatggaactggaccatcttctatgcagtggacagggagaa
tgtgtaaacgggaaatgcatttgctataaaaacaaatatggtacaatatatggtaaatac
tgtgaaaaagatgacttttcctgcccatattaccttggaaaactatgtgctggcaatgga
gaatgtgaagctggcaaatgcaagtgttttaggggctgggaaggtgatcgctgtcagtgc
gccttatctttgcaaaaacactgcatgaactcaaatggccaaatctgcagtggaagagga
atttgtgtatgtgggaaatgcaggtgtgctgaccccaacagcttaggatctttgtgtgaa
ttctgtccttcttgtaggaaagtttgcaatgacaagcgcaattgtgaatcttgccgacac
ttcaactcttcacataatacacttggccaatgcaaaaccacttgcaattatagaatgcat
tatcttgaaagatcagaatgcctttctgatgatccgagttatttcagaatatttttcatt
atatttataataacgtttttgattggtttgcttaaagtatgcataatccgtcagataatt
gtatattgtgaccatagtagaatcaagtcttcagcaggttatagagtgcctgcagccaaa
aaggataagaccttcttgcctactgtttgtgcaaaaacagtaacttaccggcgtgacaag
cctgaagaaataaacattgacaggagacaaataaatgaagcattcaaatgcagctcttga
DBGET
integrated database retrieval system
