Thamnophis sirtalis (common garter snake): 106557236
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Entry
106557236 CDS
T06107
Symbol
ABCB5
Name
(RefSeq) ATP-binding cassette sub-family B member 5 isoform X1
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106557236 (ABCB5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsr02000
]
106557236 (ABCB5)
Transporters [BR:
tsr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
106557236 (ABCB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
Rad17
RsgA_GTPase
AAA_16
AAA_30
AAA_29
G-alpha
AAA_28
PRK
Zeta_toxin
DUF2207_C
CMS1
CDC45
Motif
Other DBs
NCBI-GeneID:
106557236
NCBI-ProteinID:
XP_013931896
UniProt:
A0A6I9Z7Q4
LinkDB
All DBs
Position
Unknown
AA seq
1332 aa
AA seq
DB search
MKEHSRSYTVNDVSIPEISSNGCDNPAFQLDETSTQEGGLKNKKIKNNETSKKEKQMVGF
FELFSFADALDTILIIVGSIAAVAAGTGQPIIIIIFGQVTNSFVNTSLNVSTGNAEMNNS
ACPQAASDIENQMNNHAYYFVGVGFAVLLCSFVEIWAFVTASARQTSRIRDKFFFAVLHQ
EMAWFDTTPIGTLNTRLTEDINTVHKGIGDKIGLIIQEFSTFLMGVIIGFVYGWKLTLVI
LSVTPLIAVSGGIWSYILSVLTAKELLAYAKAGSVAEEILSAIRTVIAFNGQKKAIARYD
KNLEEALSIGTKKTITTNFSTGVSQFLMYGCYTIGFWYGTKLTIDERDNYDIGTVLIIFF
SVLMGAFALGQASPNLENVANARGAAYQVFKIIKKPRPIDSSSTDGFKLDKLRGEIEFKN
IYFSYPSRPNIQILKGLNLKIQPGQTIALVGSSGCGKSTTIQLLQRFYDPSQGQITIDGH
DVRTLNIKWMRENIGIVSQEPVLFATTIAGNIRYGREDITDAEIEEAAKEANAYDFIMKL
PDKFNTMVGERGAQLSGGQKQRIAIARALARNPKILLLDEATSALDNQSESIVQAALDKA
RAGRTTIVIAHRLSTIRTADVIAGFEKGVLIEQGTHSELMAHKGVYYALVMQQNYQEEEP
ESETSNEETKFKTEDENSDISEKEDLYETEDLNDLGSSNGDPEVAKYGSLRRVSNRPSLS
RASTKRFSERKRRKKQKKAKKVHVKETLPDVPYTRILALNKPEFCYIAIGIVAAAIGGGV
TPAFAVLFGKIIGAFQEQDDVKKSQKTVLYSIMFLVLGVISLITYIIQGFTFGKSGEALT
MRLRSLSFKALLQQEIGWFDDHNNAIGVLLTRLSTDASQVKGATGSRLALMTMTFFTLVT
ALIIAFANGWQLTLLILACIPFILVAKTFQMKSMTGHAAQDQKALEEAGRISTEVVENIR
TVVALTREDRFFENYKASLYKPHKDILKKAPINGLSYAIGMSFNFFINAAVFSFGAWLIA
HCFMNFEQLFIVFSSVVFAAMNAAQVNSLAPDFSKSKVSAQRIFHLLDQKPVIDSYSEEG
DKLEKFEGNIEFKDIHFAYPTRPEVQVLQGLNIKINKGQTLALVGSSGCGKSTSIQLLER
FYDPVSGQVIADGVDIKSLHIQWLRSRLGLVQQEPILFDCSIAENIQYGDNSRVVSQEEI
EEAAKAANIYNFIENLPEKYNTRVGDKGAQLSGGQKQRIAIARALVRKPAVLLLDEATSA
LDTESEKVVQKALDEARKGRTCIVIAHRLSTIQNSDIIAVIQNGSVVEQGTHSQLLALEG
FYYALVNAQVSH
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaacattctagaagttacacagtaaatgatgtttctatacctgaaatttcaagc
aatggctgtgacaatcctgctttccaactggatgaaacttctacacaagagggtggttta
aaaaataagaaaataaagaacaatgaaacctcgaagaaagaaaagcagatggttggattt
tttgaactgtttagttttgcagatgctctagatactattttaataattgtgggatccatc
gcagctgttgcagcaggaactggacaaccaattatcatcattatctttggccaggtgaca
aacagctttgtgaatactagtttaaatgtgtctacaggaaatgcagaaatgaataactca
gcatgtcctcaggctgcttcagatatagaaaatcaaatgaataatcatgcatactacttt
gttggagttggctttgctgtactgctctgtagttttgttgaaatctgggcctttgtgact
gcttctgcaagacaaacatcaaggatacgggataaattcttttttgctgttcttcaccaa
gaaatggcctggtttgataccacaccaattggaacattgaatacgagactaacagaggat
attaacaccgttcacaaaggtattggagacaagattggtttaataatccaagaattttca
acatttctgatgggagttataataggatttgtatatggatggaaactgaccctggtgata
ttgtctgttactcctcttattgctgtttccgggggcatatggtcatatatactatcagta
ttgactgcaaaggagctgctggcttatgccaaggcagggtctgtggcagaagaaattttg
tcagctatcaggacagttattgctttcaatggacagaagaaagctatagcaaggtatgat
aaaaacctagaagaggctctgtctattggaacaaaaaagactatcaccaccaatttttca
actggtgtatcccagtttttgatgtatggatgttataccatcggcttctggtatggaacc
aagctcacaatagatgaaagggataattatgatattggaacagtattaattattttcttt
tctgtgcttatgggtgcatttgcccttggacaggcttcccccaatttggagaatgtggcc
aatgctcgtggagcagcctaccaagtctttaaaataatcaaaaagcctcgtcccatagat
agcagttccactgatggattcaagctggataaactcagaggagaaattgaattcaaaaat
atctatttcagttacccttctagaccaaatattcagattcttaaaggtctgaatttaaaa
atacaacccggacaaaccattgctcttgttggttccagtggttgtgggaaaagcactact
attcaactcttgcaaagattttatgatccatcacaaggacagattaccatagatgggcat
gatgttcgaacccttaacatcaaatggatgagggaaaacattggcattgtaagccaagaa
ccagttttatttgctaccacaattgcaggcaatattcgttatggcagagaggatattact
gatgctgaaattgaagaagcagccaaagaagcaaatgcttatgacttcataatgaagctt
cctgataaatttaataccatggttggagaaagaggagcccagctcagtgggggtcagaaa
cagcgtattgctattgctcgtgccctggccagaaaccccaagatcttgctgctggatgag
gccacctctgctttagataatcagagtgagtctatagtccaagcagcacttgataaggcc
agggctgggcgcaccaccattgtaattgctcacagactctctacaatcaggacagctgat
gttattgcaggctttgagaagggtgttcttatcgaacaagggacacatagtgaactcatg
gcacataaaggagtttactatgcccttgtaatgcagcagaattaccaggaagaagaacca
gagagtgaaacatcaaatgaagaaacaaaatttaagactgaggatgaaaatagtgacatt
tcagagaaagaagatttatatgaaacagaagatctaaatgatttggggagttctaatggt
gacccagaagtagctaagtatggaagtttacgaagagtatccaacagaccttcactcagt
agggcttctactaaaagattttctgaaagaaaaaggagaaaaaaacagaagaaagcaaag
aaagtccatgtgaaagagactctcccagatgttccctacaccaggatcctggctctgaat
aagcctgaattctgctacatagcaattgggatcgttgctgctgccattggtggaggtgtt
actcctgcctttgcagttctgtttggtaaaattattggggctttccaagaacaagatgat
gtaaagaaaagtcagaagacagtcctatattctatcatgtttctggtgttgggagtgatc
agcttaataacttatataatccagggattcacttttgggaagtctggagaagctctcaca
atgcggttgcgctctctttctttcaaagccttgctgcagcaggaaattggatggtttgat
gatcacaataatgctattggagttttgttaaccagactttcaacagatgcttcccaagtt
aaaggagctactggaagtcgactggccttaatgaccatgactttcttcacactcgtgaca
gctcttatcattgcttttgcaaatggttggcaattaacgctgctcatcctagcttgtatt
cccttcatccttgttgcaaagacttttcaaatgaaatcgatgacaggtcatgcagctcag
gatcaaaaagcccttgaagaagctggaaggatttcaacagaagttgtagaaaatataaga
actgttgtggcattaacaagagaagatagattttttgagaactacaaagcaagcttatat
aaaccacacaaggacatactaaagaaagctcctattaatggcttatcctatgccataggc
atgagtttcaacttttttataaatgctgctgtcttcagttttggagcatggcttattgcc
cattgttttatgaattttgaacaactgtttatagttttttcatcagtggtttttgctgca
atgaatgctgcccaagttaattctcttgcacctgattttagcaagtcaaaggtttctgcc
caaagaatatttcaccttttggatcaaaagcctgtaattgacagctatagtgaagaagga
gataaattagagaaatttgaaggcaacattgaatttaaagatatccattttgcatatcca
accagaccagaagttcaggttttgcaagggctcaatataaagattaacaagggccagacc
ctggctctcgtgggtagcagtggctgtggcaagagcacttctattcaacttctagagcga
ttctatgacccagtgtcaggacaagtgattgcagatggtgtagatatcaaatctctacat
atacagtggctaagatccagactgggacttgtacaacaagaacctattctgtttgactgc
agtattgcagagaatatccagtatggagataacagcagagttgttagccaggaagaaatt
gaagaagcagccaaagcagccaatatttacaattttatagaaaatcttccagagaaatac
aatactcgagtgggtgataaaggagcacagctttcaggaggacagaagcaaagaatagct
attgctcgtgcccttgtccgaaaaccagcagttcttcttctagacgaggccacatcagct
ctggatacagagagtgaaaaggttgtccagaaagcattagatgaagctcgaaaaggccga
acctgcattgttattgctcatcgattgtcaacaatccagaattctgatatcatagcagtc
atccaaaatggcagtgtagttgaacaaggaactcacagtcagctactggcattggaggga
ttttattatgcacttgtcaatgcccaagtatcccattag
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integrated database retrieval system
