Thamnophis sirtalis (common garter snake): 106557324
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Entry
106557324 CDS
T06107
Name
(RefSeq) protein transport protein Sec23A
KO
K14006
protein transport protein SEC23
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106557324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106557324
Membrane trafficking [BR:
tsr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106557324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
APP_E2
Motif
Other DBs
NCBI-GeneID:
106557324
NCBI-ProteinID:
XP_013932018
UniProt:
A0A6I9Z4J0
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MATYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPLACLLTPLKERLDLPPVQYEPVL
CSRPTCKTVLNPLCQVDYRAKLWACNFCFQRNQFPPAYAGISEVNQPAELMPQFSTIEYI
VQRGPQTPLVFLYVVDTCLEEEDLQALKESLQMSLSLLPPDALVGLITFGRMVQVHELSC
EGISKSYVFRGTKDLSAKQIQDMLGLSRPAIPTQQGRPPQSQESPHLSSRFLQPIHKIDM
NMTDLLGELQRDPWPVTQGKRPLRSTGVALSVAVGLLEGSFPNTGARIMLFTGGPPTQGP
GMVVGDELKTPIRSWHDIDKDNARFMKKAMKHYEALSNRAAANGHCIDIYACALDQTGLL
EIKCCTNITGGYMVMGDSFNTSLFKQSFQRLFSKNLSGEFRMAFGATLEVKTCRELKISG
AIGPCVSLNAKGPSVSENELGIGGTYQWKICGLDPTMTLAIYFEVVNQHNTPIPQGGRGA
IQFVTHYQHSSTQRRIRVTTVARNWADAQSQLQHIEAAFDQEAAAVLMARLGVYRAESEE
GPDVLRWLDRQLIRLCQKFGQYSKDDPNSFRLSDSFSLYPQFMFHLRRSPFLQVFNNSPD
ESSYYRHHFARQDLTQSLIMIQPILYSYSFYGPPEPVLLDSSSILADRILLMDTFFQIVI
YLGETIAQWRKAGYQDIPEYENFKHLLQAPLDDAEEILQTRFPMPRYVNTEHGSSQARFL
LSKVNPSQTHNNLYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAS
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttacctagaatttatccagcaaaatgaagagcgtgatggagttcgcttcagt
tggaatgtttggccttccagcagattggaggccaccagaatggttgttccattggcttgt
cttctaacacctttgaaagaacggttagatttaccacctgtccaatatgagcctgttcta
tgcagtagaccaacctgcaaaactgttctcaatccactctgtcaagttgattacagagcc
aagctttgggcttgtaacttctgctttcagaggaaccagtttcctccagcatatgcaggc
atatctgaagtaaaccagccagcagaacttatgccccagttttctacaatcgaatatata
gtccagcgtgggcctcagacacccctggtctttctttatgtggtagacacatgtttggaa
gaggaggacttacaagctttgaaagaatccttgcaaatgtctttaagtctgctccctcct
gatgctcttgtgggattgattaccttcggtcgaatggttcaagttcatgaattgagctgt
gaagggatctccaaaagttacgtttttagaggaactaaagatctgtcagcgaaacaaata
caggatatgttgggtctttcaaggcctgccatccctactcagcaagggagaccacctcaa
tcccaagaatcacctcacctttctagcagatttttacagcctattcacaaaattgatatg
aacatgacagatcttcttggagaactacaaagagatccttggccagttactcaaggaaag
agacccttgcgatccactggagtagctttgtcagttgctgttggactacttgagggatca
tttccaaatactggggctagaataatgttgtttactggagggccaccaactcaagggcca
ggcatggtggtaggagatgagctgaaaactccgattcgttcgtggcatgatatagataaa
gacaatgcacgattcatgaagaaagctatgaaacattatgaggcattgtctaatcgtgct
gctgctaatggacactgcattgatatttatgcatgtgctcttgatcagactggtcttctg
gagataaagtgttgtacaaatataactgggggttatatggtgatgggagattcgtttaat
acttctctcttcaagcaaagtttccagagattgtttagcaaaaatctcagtggagaattc
cgaatggcttttggagcaactctagaagtgaaaacttgtagagaactgaagatatctgga
gctattggaccatgtgtatccttaaatgccaaagggccaagtgtttctgaaaatgaactc
ggaataggtggcacatatcagtggaaaatttgtggacttgaccccaccatgactcttgcc
atttattttgaagtagtaaatcagcacaacactccaatacctcagggtggaagaggagcc
atccagtttgttacacattatcagcactccagtacccagaggcgcattcgtgtgactact
gttgctagaaattgggcagatgcacagagtcagttgcagcacattgaagctgcatttgac
caagaagcagctgctgtcctgatggctcgattgggtgtctacagagctgaatcagaggaa
gggcctgatgtcttgcgatggctggataggcaactaattagactttgtcagaagtttgga
caatacagcaaagatgatccaaattcatttaggttgtctgattcattctccttgtacccc
cagttcatgttccatttgcgacgatctccattccttcaagtattcaataacagtccagat
gaatcttcctattaccgtcatcactttgccaggcaggatttgacccagtctcttattatg
attcagcctatactttattcttactcattctatggaccacctgagcctgtactattggat
agcagcagcattcttgctgataggattctgctgatggatacttttttccagattgttatc
tatcttggtgagactattgcccagtggcgtaaggctggttatcaagatattccagaatat
gaaaacttcaagcatttactgcaggctccactggatgatgctgaagaaattttacaaaca
agattcccaatgccacgctacgttaacacagaacatggaagcagccaggcacggtttctc
ctatctaaagtgaatccttctcagactcataataatctatacgcatggggacaagaatct
ggtgctccaatactaacggatgatgttagtctacaagtattcatggaccatctaaaaaag
ctggctgtatcaagtgcatcctaa
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