Thamnophis sirtalis (common garter snake): 106557349
Help
Entry
106557349 CDS
T06107
Name
(RefSeq) putative calcium-activated potassium channel subunit beta
KO
K04937
potassium large conductance calcium-activated channel subfamily M beta member 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
106557349
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106557349
Ion channels [BR:
tsr04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
106557349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CaKB
DUF3592
Motif
Other DBs
NCBI-GeneID:
106557349
NCBI-ProteinID:
XP_013932042
UniProt:
A0A6I9Z4L5
LinkDB
All DBs
Position
Unknown
AA seq
204 aa
AA seq
DB search
MLRKKLVAAQKRGETRALWLGLGMMACSAMMYLFIGIVLVYLHRRSVWADKSECDVVKAN
IKEDQCSSIEGSEDKYIFHYPCLEVYVNLTHLGQVVMLYYTEQTVERNPKCSYIPLVMGN
YEQVQQQVEEARDYFRMNQRIPCHYDPSGEEKSVLFKRLYPPEGFLIAFACPSMLLIGGI
LIVILVKLNQYLALVSARQRRTVM
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgttacggaaaaagttggtggcagcacagaaacgaggggagaccagggccctatggcta
ggtttgggaatgatggcctgctcagcaatgatgtatctttttattggtatcgtcctggtg
tatttacatagaagaagtgtctgggctgataaaagtgaatgcgatgtagtaaaagctaac
atcaaggaagaccaatgttcatccattgaaggctctgaggataaatatatttttcactat
ccttgtctggaagtctatgtgaatttaacccatttaggccaagtagtaatgctgtactat
acagagcaaactgtggaaagaaatcccaagtgctcttatatcccccttgttatggggaat
tatgaacaagttcagcagcaagtagaagaggcaagagattatttcagaatgaatcaaagg
attccttgccactatgacccatcaggagaagaaaagagcgtccttttcaagagattgtac
cccccagaaggctttctaattgcttttgcctgcccaagtatgctgttgattggtgggatc
ttgatagtcatcttggtaaaactaaatcagtatcttgccttagtctctgctagacaacgc
agaacagtcatgtag
DBGET
integrated database retrieval system
