Telopea speciosissima (New South Wales waratah): 122638318
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Entry
122638318 CDS
T07910
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tss03016
]
122638318
Enzymes [BR:
tss01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
122638318
Transfer RNA biogenesis [BR:
tss03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122638318
Prokaryotic type
122638318
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
122638318
NCBI-ProteinID:
XP_043687160
LinkDB
All DBs
Position
8:55682349..55689760
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AA seq
513 aa
AA seq
DB search
MAISHLRFPLSPWITNPSLCFTSSSLKFLKVFCWNLSTSALNLDVPSTSNQEIQVSGKRW
DSFRKKKVVMRVGYVGTDYRGLQKQLDEDSLSTIEAELETAIYKAGGIRDSNFGYLHKIG
WDRSSRTDKGVHSLATMISLKMEIPEYAWKEDPNGIALANYVNSNLPKNITVFSILPSQR
SFDARRECNIRKYSYLLPAEIIGIKNDFSLTEIDHHLSEFNNVLKVFEGEHPFHNYTARA
KYRKQSLKKGHKNTRIQSSSSESEESNGFEKYGVDLAAVLDVSEENLNSSHSADSDEHPI
CTSKKQGSSLTSKGFHLPPRARWLHEPDENDRLSGSHFRKIFSCSCGKLKNSSGTAYVEI
SICGESFMLHQIRKMVATAVAVKRKLLPPDILELSLNKFSRIVLPLAPSEVLILRGNHFS
LRYHPGNVTRPEMLTLVESEEIQKAVDEFYTSVLLPQLSKFLDPSNSPWKEWVEILDANT
SIPDAELEEVRKAWRSWKENFRTKPKIAFQPMN
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcaatctctcatttgcggtttccactctcgccatggattacgaaccctagcttgtgt
tttacttcctcgagcttgaagtttctgaaagttttctgttggaatctgtcgacttctgca
ctaaaccttgacgttccatcgacttcgaatcaggagatccaggtttctggcaagagatgg
gattcatttcggaagaagaaagttgtaatgcgggttggatacgttggaactgattacaga
ggtttgcaaaaacaactagacgaagattcgttatcgaccattgaagcagagctggaaact
gccatctataaggcaggtggaattcgggatagtaattttgggtatctgcataaaattgga
tgggacagaagtagccgaactgataaaggagttcattccttggcaaccatgatatcatta
aagatggagatccctgaatatgcatggaaagaagatcccaatggaattgctcttgcaaat
tatgttaactctaatcttcccaaaaatattacagttttcagcattttaccttcccaaagg
agctttgatgcaagaagggaatgtaacattcggaagtactcctatcttcttccagctgaa
attattgggataaaaaatgactttagtttaacagaaattgatcatcatttatcagagttc
aataatgtgctcaaggttttcgagggtgagcatcctttccacaactatacagcacgagcc
aagtataggaaacagtctctaaagaaaggccacaaaaatacaagaatacaatcatcttcc
tctgagtctgaggagagcaacggatttgaaaaatatggggttgatttggctgctgtgtta
gatgtcagtgaagaaaatctgaactcatcacactctgctgactcagatgagcatccaatt
tgcacttccaaaaaacaaggcagtagtttgacaagtaaaggtttccatttaccaccacgt
gcgagatggctacacgagccagatgagaatgataggcttagtggatcgcacttcagaaag
attttctcttgttcttgtggaaagctgaagaattcatcgggaacagcttacgttgagatt
tctatctgcggagagtccttcatgttgcatcaaatccgcaaaatggtggcgactgcagtg
gcagtaaagcggaagttactaccaccagatatattggaattgtcattgaacaagttctcc
cggattgttttaccactcgccccgtcggaagttttgattctgagggggaaccatttctca
ctgcggtaccatcctggtaatgtaactcgtcctgaaatgctgacattggtggaatcggaa
gaaattcagaaggcagttgatgagttctacacatctgtgctgttgcctcagttatccaaa
ttcttggacccttctaattctccatggaaggaatgggttgagatattggatgcaaacaca
agtattccagatgcagagttggaggaagtgaggaaggcttggagatcctggaaggaaaat
tttcggactaagcctaaaattgcattccaaccaatgaattga
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