KEGG   Telopea speciosissima (New South Wales waratah): 122638379
Entry
122638379         CDS       T07910                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03010  Ribosome
tss04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    122638379
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122638379
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:tss03011]
    122638379
   04121 Ubiquitin system [BR:tss04121]
    122638379
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tss04147]
    122638379
Ribosome [BR:tss03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    122638379
  Archaea
    122638379
Ubiquitin system [BR:tss04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   122638379
Exosome [BR:tss04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122638379
  Exosomal proteins of colorectal cancer cells
   122638379
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD OTU1_UBXL Fer2_3 Ubiquitin_5
Other DBs
NCBI-GeneID: 122638379
NCBI-ProteinID: XP_043687243
LinkDB
Position
8:complement(12349347..12349891)
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLALLQFYKVDDSGKVQKLRKE
CPNQECGAGTFMANHFDRHYCGKCGLTYVYQKAGGE
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagaccctgacggggaagactattacacttgaggtcgaatcctca
gacaccatcgacaatgtgaaggcgaagattcaggacaaggaaggcatcccaccggatcaa
caacgcctcatttttgctgggaaacagctcgaagacggccgaacccttgctgattataac
atccagaaggagtcgacgcttcacctggttcttcgtctcagaggaggagccaagaagcga
aagaagaagacctacactaagcccaaaaagatcaaacataagaagaagaaggtgaagctc
gcccttttacagttctacaaggttgatgattcaggaaaggttcagaagctgcggaaggag
tgccctaatcaagagtgcggagccggaacatttatggcgaatcacttcgatcgtcattat
tgtggtaagtgtggattgacttacgtttaccagaaggctggaggcgaatag

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