Telopea speciosissima (New South Wales waratah): 122638397
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Entry
122638397 CDS
T07910
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122638397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122638397
03016 Transfer RNA biogenesis [BR:
tss03016
]
122638397
Enzymes [BR:
tss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
122638397
Messenger RNA biogenesis [BR:
tss03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
122638397
Transfer RNA biogenesis [BR:
tss03016
]
Prokaryotic type
tRNA degradation factors
122638397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
Urease_gamma
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
122638397
NCBI-ProteinID:
XP_043687277
LinkDB
All DBs
Position
8:complement(61679774..61755359)
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AA seq
996 aa
AA seq
DB search
MAALRSRGNPLLSSVPTFLTWRRFGFRSICSGRIGFLPSSDSGTPVAGTKVLETFTEEFE
IGSRSIILETGKIARFANGAVVMGMEETKVLSTVASAKGDGARDFLPLTVDYQEKQFAQG
LIPTTFMRREGAPKERELLCGRLIDRPIRPLFPAGFYHEVQVMASVLSSDGKQDPDVLAA
NATSAALMLSDIPWGGPIGVIRIGRICGQFVINPSMEEMSVSDLNLLYACTRDRTLMIDV
QAREISERDLEAGLRLAHPEATKYLEPQIRLAAKAGKHKKEYKLSMLSDTTLEKVKSLAE
GAIEAVFTDPTYGKFERGEALDNITQDVKRVLEEECDEESLKVLPKAVDMVRKKIVRRRI
IEKGIRVDGRRLDEVRPLYCESGNLPILHGSSIFSRGDTQVLCTVTLGSPGDAQRLDSLV
GPSTKRFMLHYSFPPFSINEVGKRGGLNRREVGHGTLAEKALLAVLPPEDDFPYTVRVNS
EVMASDGSTSMATVCGGSMALMDAGIPVREHVAGVSVGLVSEVDPSTGMINDYRILTDIL
GLEDHLGDMDFKIAGTRKGITAIQLDIKPAGIPLDIICESLDVAVKGRLQILDHMEREIN
APRTQDDRNSPRLATLKFSNDSLRRLMGPQGVQKRKIEQETGARLTVSDGALTILAKNQE
IMEKAQGKIDFIVGREIEVGGIYKGVVASIKEYGAFVEFNGGQQGLLHISELSHDQVSRV
SDVVSVGQQLSLMCIGQDVRGNIKLSLKATVPRPGSMKNPAEGCFNSMKQPCNDCASVED
VSNCQENPYSNLEEFSISKDDSGETSFTSSQPSILIRSVAECDEEDRTTCFGQKDAKKNG
NKSSKPFPSRRNGEGHNLPLSSIDLSSHKNVIDSQSITQQQRENEFGSIVGRKDESEDGY
KSAHTPAEEAMNVKNVKNAVGAAGINAKTLKIGDQLTAKVYQIRTHGLVLELGGGLRGMY
RFETNGRSDYEVGDELRVECSSFSSKGIPVMSVLED
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggcagctctacggagcagaggcaaccctcttctctcatcagtcccaaccttcctgacg
tggagaaggtttggcttccgcagcatttgcagtggccgcattggattcctgccatcgtct
gattccggaaccccagttgccggcacaaaggttctggagacgtttacagaagagtttgag
attgggtctcgttcaattatcctggaaaccgggaagattgctcggtttgcgaatggtgcg
gttgttatgggcatggaagagactaaagtactctcaactgttgcctcagctaagggagat
ggagccagagatttcttaccactcactgttgattatcaagaaaagcaattcgctcaaggt
ttgatccctactacattcatgcgaagggagggtgctcctaaggaacgtgaacttttatgt
ggccgtcttattgaccgaccaatacggcccttgtttcctgctggtttttaccatgaagtc
caggtaatggcaagtgttctttcatctgatgggaagcaagatccagatgtgttggcagct
aatgctacatctgctgctcttatgctatcagacattccctggggtggccccattggggtg
atacgtatagggaggatatgtgggcaatttgtcattaaccctagcatggaagagatgagt
gtaagcgatctcaacttgttatatgcctgcacacgagatagaactttaatgatagatgtg
caagcccgtgagatctctgagagagatctggaagcaggattaaggttagcccatcctgag
gcgacaaaatatctagaacctcagattagattggctgcaaaagcagggaagcataagaag
gaatataaattatcaatgctatcagatacaacccttgagaaagtcaagagcttggcagaa
ggggcaatagaagctgtttttacagatccgacttatggaaagtttgaacgtggagaagcc
ttagataatattacacaagatgtaaaaagagtcctcgaagaagaatgtgatgaggagagc
ttaaaagttttgcccaaggcagttgacatggtgaggaaaaagattgttcgtagaaggata
attgagaaaggaatcagagttgatggtagacgtctagatgaagttaggcctttatactgt
gaatctggtaatttaccaatattgcatggatcatcgattttttctcgtggagatacccag
gttctatgcactgtgacactgggctcacctggagacgctcagagattggattctctggtt
ggtccatccacaaagcgttttatgcttcactatagttttccaccattctcaattaatgaa
gttggtaaacgtggtggtttgaataggcgtgaagttgggcatggcacacttgcggagaaa
gctttgcttgccgtgttacctcctgaagatgatttcccatatactgtccgtgtcaattca
gaagtcatggcttctgatggctcaacttcaatggcgaccgtctgtggaggaagtatggct
ttgatggatgctggtattccagtaagagaacatgtagcaggtgtttcagtgggtcttgtt
agtgaagttgacccatcaactggaatgattaatgattatcgcatattgacagatattttg
ggcctagaagatcatctaggcgacatggacttcaaaattgctgggacaagaaaaggaata
actgctattcagttggatatcaaacctgctggaattccgttggatatcatctgtgaaagt
ttggatgttgcggtaaagggtcgtcttcaaatccttgaccatatggagcgtgagataaat
gcaccgcgcactcaagatgataggaattccccacgattagctacactgaagttcagcaat
gattcccttcggcgcttgatgggcccccaaggtgttcagaagaggaaaatcgaacaagaa
acaggtgcacgactcactgtgagtgatggggcacttactatccttgctaagaatcaagag
ataatggaaaaggcacagggaaagattgattttattgttggtcgtgagattgaagttggg
gggatttataaaggtgttgtagcatcaatcaaagaatatggggcttttgttgaattcaat
ggtggtcagcaagggctgttacatatctccgagttgtctcatgatcaggtctctcgagtt
tctgatgtagtatctgtaggccaacagctttcactaatgtgcattgggcaggatgtacgg
ggtaatatcaaactctctcttaaagcaactgtacctcgtcctggatccatgaagaatccg
gctgaaggatgttttaattctatgaaacaaccatgtaatgattgtgcatctgtcgaggat
gtgtctaactgccaagaaaatccttactccaacctggaagaattttcaatcagcaaagat
gacagtggtgaaacttctttcacttcttcacaaccatcaatccttattcgaagtgttgcc
gagtgtgatgaagaggatagaactacatgttttggtcagaaagatgcaaagaaaaatggg
aataaatcttctaaaccatttccatctcgtagaaatggagaaggccacaatttgcctttg
tctagtattgacctctcatcacataaaaatgttattgattcacagtctatcacacaacaa
cagagagaaaatgagtttggttcaattgttggaagaaaagatgaaagtgaggatgggtac
aagtctgcacatacacctgcagaagaggctatgaatgttaaaaatgttaaaaatgctgta
ggtgcagctggtattaatgcaaaaacattgaagattggagaccaattgactgccaaggtt
taccagatacgtacacatgggttagtcctcgagttgggtggtggacttcgtgggatgtat
cgatttgagactaatggcaggagtgactatgaggttggtgatgagttgcgcgttgagtgc
tcaagtttctctagcaaaggaattcctgtgatgtctgtgttggaagattag
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