Telopea speciosissima (New South Wales waratah): 122638712
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Entry
122638712 CDS
T07910
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03030
DNA replication
tss03410
Base excision repair
tss03420
Nucleotide excision repair
tss03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122638712
03410 Base excision repair
122638712
03420 Nucleotide excision repair
122638712
03430 Mismatch repair
122638712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tss03032
]
122638712
03036 Chromosome and associated proteins [BR:
tss03036
]
122638712
03400 DNA repair and recombination proteins [BR:
tss03400
]
122638712
DNA replication proteins [BR:
tss03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122638712
DNA Replication Termination Factors
ELG1-RFC complex
122638712
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122638712
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122638712
Check point factors
HRAD17(Rad24)-RFC complex
122638712
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
nSTAND_NTPase5
RuvB_N
AAA_lid_RFC1
Mg_chelatase
Rad17
AAA_16
Viral_helicase1
RCF1-5-like_lid
AAA_11
AAA_5
nSTAND3
AAA_18
AAA_25
AAA_19
AAA_assoc_2
AAA_3
AAA_28
AAA_24
DNAX_ATPase_lid
ABC_tran
MeaB
AAA_30
bpMoxR
AAA_7
RNA_helicase
NTPase_1
FtsK_SpoIIIE
NPHP3_N
DO-GTPase1
SRP54
MipZ
IstB_IS21
KTI12
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
122638712
NCBI-ProteinID:
XP_043687503
LinkDB
All DBs
Position
1:78058608..78071095
Genome browser
AA seq
333 aa
AA seq
DB search
MAASSSSTSGSNYDVPWVEKYRPSKVADIVGNQDCVSRLQVIARDGNMPHLILAGPPGTG
KTTSILALAHELLGTNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVIILD
EADSMTSGAQQALRRTMEIYSNSTRFALACNMSSKIIEPIQSRCALVRYSRLSDQEILGR
LMIVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNPENVFKVCDQPHPL
HVKNMVRNVLEGKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETG
FAHMRICDGVGSLLQLSGLLAKLALVRETAKAV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttcatcttcttcaacatcaggcagcaactacgatgtcccatgggtggagaag
tacagaccctccaaagtagccgacattgttgggaaccaagattgcgtctcgaggcttcaa
gtcatcgccagagatggcaacatgccccatctcatcttggccgggcctccaggaactggt
aaaacaacaagtattttggcccttgcgcacgagctactgggaacaaattgcaaggaggct
gtgctagagctcaatgcatctgatgacagaggaattgatgtcgtgagaaacaaaattaag
atgtttgctcagaagaaagtaacgctcccccctggaaggcacaaagtaatcattttagac
gaggcagacagtatgacatctggagcacaacaagctttgaggcggacaatggaaatttat
tcaaactccacacgttttgctcttgcgtgtaatatgtcttctaagataattgagcccatt
cagagtagatgtgcccttgttcgttattctagattgtcagaccaagagattcttggccgt
cttatgatcgtcgttgaagctgagaaggttccatatgttccagaaggccttgaagcaatt
attttcactgctgatggtgatatgaggcaggctttgaataacttgcaggccacatacagt
ggtttcaggtttgtcaatccggaaaatgtgttcaaggtctgtgaccagcctcacccctta
catgtgaagaatatggtccgcaatgtgcttgaagggaaatttgatgatgcctgttctggt
ctgaagcagctctatgatttgggttattctccgactgacataatcacaaccctattccgg
ataattaagaactatgatatggctgagtatctgaaactggaatttcttaaggaaactgga
tttgcacacatgagaatctgtgatggagttggctcacttcttcaactatctggtctccta
gctaagcttgccctagttcgggaaacggctaaagctgtgtaa
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integrated database retrieval system
