Telopea speciosissima (New South Wales waratah): 122638973
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Entry
122638973 CDS
T07910
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122638973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tss03041
]
122638973
Spliceosome [BR:
tss03041
]
Common components
Common spliceosomal components
SR proteins
122638973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
122638973
NCBI-ProteinID:
XP_043687755
LinkDB
All DBs
Position
1:complement(85349225..85379718)
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AA seq
327 aa
AA seq
DB search
MEVFAHPQEIFYTSEKKSERGRGDQILFKFIKAVEHLGAYEEWSMRSTTHIEDCSLENVR
IAASSISEMSGRSTRTIYVGNLPSDIREWEIEDLFYKYGRIVDIELKIPPRPPGYSFVEF
ENARDAEDAIRGRDGYNFDGHRLRVELAHGGRGQSSSIDHRRGYGGGGGGGRFGGVSRHS
EYRVFVRGLPSSASWQDLKDHMRKAGDVCFVQVFRDGDGTMGVVDYTNYDDMKYAIRKLD
DTEFRNPFSRAYIRVKSYEGSPSRSHSRSRSRSRSRSVKRDRGKSLDRSVSRSPSKSRSP
SHARLPRPRSRSRSRSDSPRQARSGSA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggaggtttttgctcatcctcaagagatcttctacacctctgaaaaaaaatcagagaga
ggacgaggagatcaaatattattcaaatttataaaagctgtggagcatcttggagcatat
gaggaatggagcatgaggagcaccactcacatcgaggattgctctcttgaaaacgtgcgc
attgctgcatcttccatatcagagatgagtggtcgttctactcgtacgatttatgttggg
aaccttccttctgatatacgagaatgggaaattgaagacctattttacaagtatggtcgt
atagtggatattgaattgaagatcccccctcgccctcctggttattcttttgtggagttt
gaaaatgctcgcgatgctgaagatgcaattaggggtcgggatggatataactttgatggt
catcgtttgagggttgagcttgcccatggtggtagggggcaatcttcgtcaattgatcat
cgtcgtggttatgggggtgggggtgggggtggacgatttgggggtgtatcacgccattct
gaataccgagtttttgttcgtggactgccctcttctgcttcatggcaagatttgaaggat
cacatgcggaaggctggtgacgtgtgctttgtccaagttttccgtgatggtgatggaacc
atgggtgtggtagactatactaattacgatgacatgaaatatgctatccgtaaacttgac
gacactgaatttagaaatccattttcaagggcttatattcgggtgaaaagttatgaaggc
agtccatcaaggagccatagtcgaagtaggagtcgcagtaggagcagaagtgtgaaaagg
gatcggggcaaatctttggatcgatctgtctcaagatcaccatcaaaatctaggtccccc
tctcatgccagattgcccaggcccaggtcaaggtcgagatctaggtcggattcaccacgc
caggctcgatcaggaagtgcatga
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