Telopea speciosissima (New South Wales waratah): 122639127
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Entry
122639127 CDS
T07910
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00040
Pentose and glucuronate interconversions
tss01100
Metabolic pathways
Module
tss_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122639127
Enzymes [BR:
tss01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122639127
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
122639127
NCBI-ProteinID:
XP_043687891
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Position
9:complement(55627321..55634854)
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AA seq
444 aa
AA seq
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MGSLGTPRDMHDYVVASRYLGVSILSFLFCLASIFAWASSRYVPSVKIFDVMDFGAVGDG
KTDDSLAFLKAWARACKSTARSTLSIPDKTFLLNPLKFFGPCKSSNITVQISGKLTAPSD
ISEWKVSERDFWIQFGFIYGLTITGSGSAQIDGRGLSWWNCKNDKKCLKVPNFYPNFSDL
LLQTLVINNTIGLRMNGLKFIDSPRMHLVIGHSSWVQVSQLYIVAPEDSPNTDGIHVTHS
KHVEITDSIIGTGDDCISIETRSIDVNISRIKCGPGHGISIGSLGDDVAKAIVEKIHVSN
CQFVGTMNGARIKTWQGGTGFARGITFVDFTMTAVDHPIVIDQYYCNGGHNCTNQCVGDL
QQILITNAKTLAVQVSNVMFSRIKGSSTRKVAIDLACSETVPCTNIYLEDIVLRSTTPGN
ETTAYCDSVYGTASSVEPFVKCLA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgctgggtactccaagagacatgcatgactatgtagtggcgtctcgttatttg
ggcgtttctattctctcttttttgttttgtttggcttcaatatttgcatgggcttcttca
agatatgtcccttcagtgaagatttttgatgtcatggactttggagcagttggagatggc
aaaactgatgactctctggcattcttgaaagcatgggctagggcttgtaaaagtactgca
cgttccaccttaagcattccagacaagaccttcttgttgaacccattgaaattttttggt
ccatgcaaatcatctaatattactgtccagatttcaggaaagctaacagctccaagtgat
atatcagaatggaaagtttctgaaagagatttctggattcaatttggttttatttatgga
ctaacaatcactggatcaggatctgcccagattgatggacgtggtttgtcctggtggaat
tgcaaaaatgataaaaagtgcttgaaagtgcccaatttttaccctaacttttctgatctg
ttactgcagacattggtaatcaacaatacaattggtcttcgaatgaatggtttgaaattc
attgacagcccaagaatgcatttggtaattggacactctagttgggttcaggtttcacaa
ttgtatattgtagcacctgaggacagtccaaacacagatggtatacatgtaactcatagt
aaacatgttgagatcacagactcaatcataggaactggagatgattgtatttcaattgaa
accagaagcatcgacgtgaatattagtcgaattaaatgtggcccgggacatggcataagt
attggaagcttaggggatgatgtagcaaaagcaatagttgaaaaaattcatgtctcgaat
tgtcagttcgttgggacgatgaacggggcacggataaagacatggcagggtggaactggt
tttgctagagggatcacatttgtggacttcactatgactgcagttgaccatcctattgtc
attgatcagtactactgtaatggtggacacaattgcacaaaccaatgtgttggtgatctt
caacaaattcttatcacgaatgcaaagacattggctgttcaagtaagcaatgttatgttc
tccaggataaaagggtcttccacaagaaaagtcgccattgatcttgcatgtagtgagact
gttccttgcacaaacatctatttagaggatattgttctgagaagtaccactccaggaaat
gagacaactgcttattgtgattctgtatatggaactgcatcttctgtcgaaccatttgtc
aaatgcctagcatag
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