Telopea speciosissima (New South Wales waratah): 122639209
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Entry
122639209 CDS
T07910
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tss03016
]
122639209
Enzymes [BR:
tss01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
122639209
Transfer RNA biogenesis [BR:
tss03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
122639209
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GFIT
Motif
Pfam:
RNB
WHD_RNase_II
HTH_RNase_II
CSD_RNase_II
Motif
Other DBs
NCBI-GeneID:
122639209
NCBI-ProteinID:
XP_043687967
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Position
1:complement(27574860..27587190)
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AA seq
791 aa
AA seq
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MAMAMRAANSYSIFRSANSSLSVVRCSLSYFRPSHVSRNPKLGHRAMLSDKLIVRGNTLR
CSVHSLVDSVIEELEAIRTRKRGRASSKTGLISSKDLVEDKLEKQVLQKGLLLEFRKDSE
RVLLAVAQKPDGKKNWMVSDQQNGITSSIKPQQITYIVPGVENFDQAEILNFIQKAHDNL
DPSLLEYAWMELLEKNKSVTPEELAEIIFGSMDPLESYCAHLLLSRDEIYFSTVESKSSH
SVYEPRPTVQVEELLSRKHAKEAAEKELQEFVQLLISAKAMPSHSKPPKKSWMVEENICQ
RIESLEAYAIDACKTDDQKKMAGVILKAMGLPKMSSSALNLLIDIGYFPVHVNLDLLKFN
IRTEYSDEIMSAAESLLSDSPDLDMMVRKDVTHLKVYAIDVDEADELDDALSATRLPDGQ
IKVWIHVADPTSLVQPGSIIDREAMRRGTSIFLPTATFPMFPEKLAMEGMSLKQGKVCNA
VTVSVTLHPDGSIAEYTVDNSIIRPTYMLTYESASELLRLNLEEEAELRILSEAAALRLQ
WRRQQGAIDTTTIEARVKVANPDEPEPSINLYVENQADPAMRLVSEMMILCGEVIATFGS
SNNIPLPYRGQPQSNIDSSIFAHLPEGPVRSSAYVKIMRAAEMNFRSPIRHGILGIPGYV
QFTSPIRRYMDLLAHYQVKGFLRGDAPPFSAGQLEGMASLINMHVRVAKRLFNSSLRYWL
LEFLRRQPKEKKFRALILRFIKDRMAALLLMEVGIQASSWVSVGVQIGDEIEVKVEEAHP
RDDAVSLKEVI
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggctatgagagcagcaaacagctattcaatctttcgctctgctaattcttct
ctctccgtagttcgatgtagtttatcctattttcggccctcgcacgtgagtagaaacccg
aaattagggcatcgagcaatgctttcggataagctcatagttcgtggcaacactctgcgt
tgttctgttcatagcctcgtcgatagcgtcattgaagagctcgaagcgattcgcacaagg
aagcgaggccgtgccagcagcaaaacgggattaataagcagcaaggatcttgttgaagat
aaacttgagaagcaggtgctgcagaaagggctactgctggaattccggaaagattctgaa
agggtattgctggcagttgctcagaaacccgatgggaagaagaactggatggtttccgat
cagcagaatggcatcacatcctccattaaaccccaacaaattacatatattgttccgggt
gtcgaaaattttgatcaggcagagattttaaattttattcagaaagctcatgataatttg
gacccatcattacttgaatatgcttggatggagcttctggaaaagaacaagtcagtgaca
ccagaagagcttgccgagattatatttggtagcatggatccattggaaagttactgtgcc
catttgttgctatcaagagatgaaatttatttcagcaccgtggagtctaaaagttcccat
tctgtttatgagccccgtccaactgttcaggtagaagaacttttaagtcggaagcatgca
aaggaggcagctgaaaaggagcttcaggagtttgtacagctattgatatctgccaaggca
atgccttcacattctaaacctcctaagaagtcatggatggtggaagagaatatttgtcaa
aggattgaatctctcgaggcttatgctattgatgcatgcaaaacagatgaccaaaagaaa
atggctggagtgatccttaaggcgatgggactgccgaagatgtcatcttctgctttaaat
ctcctcattgatattgggtatttccctgtacatgttaaccttgatctcttgaagttcaac
atccgtactgaatattcagatgagattatgtcagccgctgaaagccttttgtcagactca
cctgatctggacatgatggtccggaaagatgttacacacctgaaggtctatgctattgat
gttgatgaagctgacgagcttgatgatgccctaagtgcaacaaggcttccagatggccag
atcaaagtttggatacatgttgctgatccgactagcttggttcaacctggaagcataatt
gacagagaggcaatgagaagagggacatctattttcttgccaactgccacttttcctatg
ttcccggagaaacttgcaatggagggaatgagcttaaaacaaggaaaagtttgcaatgct
gtcacagtatctgttacactgcatcctgatggcagcattgcagaatacacagtagataac
tcaatcatcagacctacctatatgttaacatatgagagtgcatctgagttgcttcgcttg
aacctggaagaggaggctgaactgagaattctttccgaggctgctgccctccggttacaa
tggcgacgccaacagggtgccattgacacaaccacaatagaagcacgtgtcaaggtggct
aatccagatgaaccagagccatccatcaatctctatgttgaaaatcaagcagatcctgct
atgcgacttgtctcagagatgatgatactgtgtggagaagttatagccacctttggttct
tccaacaacatacctttaccttacaggggacagcctcagtcaaacattgattcatctata
tttgcccatctcccagaaggacctgttagaagctctgcatatgttaaaattatgcgtgca
gcagaaatgaatttcaggagtcctatacgccatggtatcttggggattcctggttatgtg
cagtttacatctccaatccgcagatacatggatcttcttgctcactatcaggtgaaaggc
tttcttagaggagatgctcctcctttttcagctggtcagttggaagggatggcatcactg
ataaacatgcatgttagagtagcgaagagactcttcaacagcagccttcggtattggtta
ttagagttcctgagaaggcaacccaaagaaaagaaattccgtgccttgatccttagattt
atcaaagatcgaatggcagccttactgttgatggaggttggaattcaagcttcttcttgg
gtatccgtgggtgtacaaattggagatgaaatagaagttaaggtggaagaagctcatcca
cgtgatgatgctgtgtcactcaaggaagttatttga
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