Telopea speciosissima (New South Wales waratah): 122639264
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Entry
122639264 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG4-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122639264
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122639264
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122639264
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
RVT_2
zf-C3HC4_3
Prok-RING_4
zf-C3HC4_2
zf-RING_2
zf-C3HC4
vWA-TerF-like
Sina_RING
zf-RING_5
zf-P11
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
122639264
NCBI-ProteinID:
XP_043688016
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All DBs
Position
9:63500135..63515938
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AA seq
552 aa
AA seq
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MAVASMYNLVIHQMNVKTAFLNGDLVEEIYIKQPEGYVVPGQEHKVYDMLIMGTSLDIIK
QTKGFLMSKFDTKDMGDANGTIAYGLHYSGKPAVLEGYCDANWISDTKETLAISGYVFTL
GGGAISWKSIKQSCVTGSTMEAEFIALEKMFRKLRRSNTGSSRKVASRALSGSSTISEAS
PSVTPRSLPVPHSGKTSSNKYAFIPDNFKTLEQVTAALRESGLESSNLILGIDFTKSNEW
TGKHSFNNRSLHAIGNIPNPYEQAISIIGKTLAPFDEDNLIPCYGFGDATTHDQEVFSFH
SDHTPCHGFEEVLTCYKQIVPNLRLSGPTSFGPVVEAAIDIVEKSGGQFHVLVIIADGQV
TRSVDTKEGARSPQEESTINSICTASSYALAIVLVGVGDGPWDEMRRFDDRLPARKFDNF
QFVNFTDIMSKNMNPSEKETAFALAALMEIPIQYKATMELGIHGHKTGRAKKIVPRPPPV
PFMRRQQPVSEPSNAPVVSSGEPNQVCPICLTNEKNLAFGCGHLTCRDCGQSLSNCPICR
APIRSRLRVYTG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgcgtctatgtataatttggttatacaccaaatgaacgtgaaaacagcgttt
ctaaatggcgacttggtagaagaaatatacattaagcaacctgaaggttatgttgtgcct
ggacaagaacacaaggtgtatgacatgttgataatgggaacaagtttagacattataaag
caaactaaaggtttcttaatgtctaagtttgatacaaaggacatgggggatgctaatgga
acaatagcctatggccttcactatagtggaaaaccagccgtgttagagggctattgtgat
gctaactggatttcagataccaaggaaacattagcaattagtggatatgttttcacatta
ggaggtggagcgatttcgtggaaatcgataaagcaatcctgtgttacaggatccaccatg
gaagctgagtttatagctttggaaaagatgtttcgaaagcttcgccggagtaatactgga
agtagtagaaaggttgcatcgagagctttgtcagggtctagtactatttctgaagcctcg
ccgtcggtcaccccacgcagtcttcctgttcctcacagtggcaaaacctcgagcaacaaa
tatgcgttcatacccgacaatttcaagactctcgaacaggttacagctgctttgagggaa
tcaggtcttgaatcatcaaaccttattcttgggattgacttcacaaaaagcaatgaatgg
acaggcaaacactcattcaataaccggagcctgcatgcgattggcaatatacctaatcca
tatgagcaagctatttctatcattggcaagactttggccccctttgatgaagacaacttg
attccctgttatgggtttggtgatgccaccacccatgatcaagaggtgttcagttttcac
agtgatcatactccttgtcatggctttgaagaggttttaacgtgctataaacagattgtt
ccaaacttgcgattgtcagggccaacatcttttggacctgtagttgaggctgcaattgac
attgtggagaaaagtggcggacaatttcatgttttggttatcattgctgatggccaggta
acaagaagtgttgatacgaaggaaggagctcgcagcccacaggaagagagtacaattaac
tcaatttgcactgcaagttcatatgcacttgcaattgtgcttgttggagttggtgatgga
ccttgggatgaaatgaggaggtttgatgatcggctccctgcacgcaaatttgacaatttt
cagtttgttaacttcactgatatcatgtcaaaaaacatgaacccctccgagaaagaaaca
gcatttgctctagctgcactgatggagatccctatccaatataaagcaacaatggaactt
ggaatccatggtcacaaaacagggagagcaaagaagatagttcctcgcccgcctcctgtt
cctttcatgcgccgacaacagccagtttcggaaccaagcaacgccccggttgttagtagt
ggtgaaccaaatcaagtgtgcccaatctgccttactaatgaaaagaatttagcgtttggg
tgtgggcatctgacttgtagagattgcggtcaaagtttgtctaattgtcccatatgccgt
gcgccaattaggtctcgtctcagagtatatactggttga
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