Telopea speciosissima (New South Wales waratah): 122639456
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Entry
122639456 CDS
T07910
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tss01009
]
122639456
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122639456
Enzymes [BR:
tss01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
122639456
Protein phosphatases and associated proteins [BR:
tss01009
]
HAD phosphatases
Fcp/Scp phosphatases
122639456
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122639456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Fructosamin_kin
Motif
Other DBs
NCBI-GeneID:
122639456
NCBI-ProteinID:
XP_043688256
LinkDB
All DBs
Position
9:complement(12601478..12653690)
Genome browser
AA seq
941 aa
AA seq
DB search
MFKSVVYQGNSLLGEAEIYPQNQKIDMMNKEIRIAHFSQPSERCPPLAVLHTIAPCGICL
KMESKALSGDSPLLSLHTSCFRENKTAVMPLGEEELHLVAMSSKNKDEQYSCFWGFKVAP
GLYNSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINTEVDPQRISGMLAE
VKRYQDDKIILKQYAENDQVIDNGKVIKVQSEVVPALSDNHPSIVRPLIRLQDKNIILTR
INPVIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLI
NSIELLNRIVCVKSGLRKSLLNVFQDGICHPRMALVIDDRLKVWNEKDQPRVHVVPAFAP
YYAPQAEANNAVPVLCVARNVACNVRGGFFKEFDEGLLQKILDVRYEDDMTDIPSAPDVS
NYLISEDDASASNGNKDPLCFEGMSDVEVERRLKDAIQASSLDPRLAPSQHAVTSSSVSI
SQPISQGPISLTNKQFAQAASLVHVGLSESTLQSSPAREEGEVPESELDPDTRRRLLILQ
HGQDTRDHTSSEPAFPIRPSLQVSVPPVQSRGSWFPLEEEMSPRQLNRAVPKEFSLESEA
MHFDKRRSHHPSFIHGVEGSISSDRTLNENQRLPKEGHNGDEKLRLNRSVSSFQSLLGEE
VPLGRSPSAKRDLHFDSGRGTPPYSESPAVALQEIATKCGSKVEFRPALVASTELQFSIE
VWFTGEKIGEGIGKTRKEAQQQAAESSLRNLANKYLSHVKPDPSLVHGDLNKLPHTNENG
FVDDTNSSGYLPFSKEESIAFSTTSEPSRILDPRTDGSKKSMGSVAALKELCVMEGFNLV
FQPQPPLSISSMQKGEAYAQVEIGGQVFGKGIGSTWDEAKLQAAEEALTSLKSMLGQYTQ
KRPGSPRSSQSTPSKRLKPELSRVLQRIPSARYAKNTPPVP
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaatcggtggtttatcagggcaattctctactcggagaagcagagatttaccct
cagaaccagaaaatcgacatgatgaacaaggaaatcagaatcgctcacttctcacagccg
agtgagaggtgtccaccactcgcagttcttcacactatcgccccctgtggcatttgcctc
aaaatggagtcgaaggcgctgtcgggagattcgccgttgttgtctttgcacacctcttgt
ttcagagagaacaagactgcagttatgcctcttggggaagaggagctccatttggtggcc
atgtcttcaaagaataaagatgaacagtattcatgtttttggggtttcaaggttgcacct
ggactttataattcttgcctcgtcatgctgaaccttagatgtttgggcattgtatttgat
ctcgatgagacactaatagttgcaaatacaatgcgctcatttgaggaccgtattgatgcc
ttacagcggaaaataaacacagaggtggacccacaacgcatttctggtatgttagcagag
gtcaagcggtatcaagatgacaagataattttgaagcagtatgctgaaaatgatcaggtt
attgataatgggaaggtaattaaagttcaatccgaggttgttccagctttgtccgacaac
catccgtcaattgttcggccacttataaggctgcaggataagaatattattctgactcgc
atcaatccagtgattcgtgatacaagtgtacttgtaaggctgagacctgcatgggaggat
ctccgaagctacttaactgcaagaggtcgcaaacgttttgaggtttatgtctgcacaatg
gctgaaagagattatgccctagaaatgtggaggcttcttgatccagaatcaaatttaata
aactcgatagaactgttgaatcgcatagtctgtgtcaagtctggtttaaggaagtctctg
ctcaatgtgtttcaagatggaatctgccatcctagaatggcattggtgattgatgatcgc
ttgaaagtgtggaatgagaaagatcaacctcgggtgcacgttgttcctgcatttgctcca
tactatgctcctcaagctgaagcaaacaatgcagttccagtcctatgtgttgcaagaaat
gttgcttgtaatgttagaggtggttttttcaaagagtttgatgagggtcttctacaaaag
attcttgatgttcgctatgaagatgacatgacagatattccttctgctcctgatgtgagc
aactatttgatctcagaggatgatgcttctgcttcaaatggaaacaaagatcccctttgt
tttgagggaatgtccgatgttgaagttgaaagaagactaaaggatgcaattcaagcatct
tccctggacccaaggcttgccccttcccaacatgcagtgacgtcttcatctgtttcaatt
tcacagccaatttctcaaggaccaatttctttaactaataagcagtttgctcaagcagcc
tcattggttcatgtgggcctttcagaatctacattgcaaagttctcctgctagagaagaa
ggcgaggtcccagaatcagaattagatcctgatacaaggaggagacttcttatattgcag
catgggcaagacacaagagaccatacctcaagtgaaccggcatttccaataagaccttct
ctacaagtttcagtcccacctgtccaatcacgtggaagctggtttccattggaagaagag
atgagccctagacaactgaaccgagcagtacccaaggaattttctttagaatcagaagca
atgcattttgataagcggagatctcatcatccttctttcatacatggagtggagggttct
atttcttctgatagaactcttaatgaaaaccaaagattgcctaaagagggacataatgga
gatgaaaagttgaggttaaaccgatcagtatcaagttttcaatcattattaggtgaagag
gtgcctttgggtagatctccttctgccaagagggatcttcattttgattctggacgtggt
acaccaccatattcagaaagtcctgcagtggccctacaagaaattgcaacaaaatgtgga
agcaaggtggagttcagacctgctttggttgctagcacagaactgcaattctccattgag
gtctggtttactggggaaaaaattggtgaaggaattggtaagacaaggaaggaggctcag
cagcaggctgccgagagctctcttaggaatttggccaataaatatctctcacatgtcaag
cctgaccctagcttggtacatggggatttgaacaagcttccgcatacaaatgagaatggc
tttgtagatgatacaaattcttctgggtatctgccattctccaaggaagaatctattgca
ttttcaactacatcagagccatccaggattctagacccaaggacagacggatctaaaaaa
tctatgggatctgttgctgcccttaaagaattatgtgtgatggaggggtttaatctagtt
tttcaacctcagcctccactttcaataagttcaatgcagaaaggcgaagcatatgctcag
gtcgaaattggaggccaagtctttgggaagggaattgggtcaacatgggatgaagctaaa
ctgcaggctgctgaagaggcccttacgagtctgaaatcaatgcttggtcagtatactcag
aaacgtccaggctctccaagatcatcacaatcaaccccaagtaaacgattgaagccagag
ttatcacgagtattgcagcggataccttctgcaagatatgcgaagaacacccctcctgtt
ccttga
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