Telopea speciosissima (New South Wales waratah): 122639508
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Entry
122639508 CDS
T07910
Name
(RefSeq) nuclear-pore anchor isoform X1
KO
K09291
nucleoprotein TPR
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122639508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122639508
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122639508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
122639508
NCBI-ProteinID:
XP_043688307
LinkDB
All DBs
Position
9:complement(63286853..63400095)
Genome browser
AA seq
2090 aa
AA seq
DB search
MPLFLSDEEFQWCSHDASLVAEKADAFIRDLHRQLETVKAQADASAITAEQTCALLEQKY
ITLSAEFGKLESQNAQLNAVLEQRLTELAEVQAEKHQLHLKAIAKDGEIERLSTEVSELH
KSKRQLLELLEQKDIEIGEKNATIQSYLDKIVNMTGNASQKEARLRDSEAELARCRAACD
RLSQEKELIEKHNAWLNEELTAKTGDLLKFRKTHAELEADTSAKLDDVERQLNESSSSLK
WNKERVRELELKLASVQEEFCSCKDAAATNEERFSAEIATVTKLVELYKESSEEWSRKAG
ELEGVIKALEMHLSQVENDYKEKLEKEVSVKTEIEKEAGVLKEKLEKCEAEMENNRKANE
LSILPIGSFTKEIWVRGTEPDDSSEDSRMLVPKVPVGISGTALAASLLRDGWSLAKMYEK
YQEAVDAVRHERLGRKQSQAILERVLFEIEEKAALILDERAEHERMVEAYSVMNERLQES
LAEQAQLEGSIRELKAELKRHERDHSLAQKEIVDLQKQVTILLKECRDIQLRCGSGSDIY
ADDSLLPLEMHDESDAERVISERLLTFKDINGLVEQNVQLRSLVRSLSDQNEKINAELRE
KFELELQRHGEEAATKVLTVLKRAEEQGRMIESLHSSVAMYKRLYEEELKRHASYPHSTE
AVSEDGRKDLMLLHEVSQEATNKAHEQATERVKSLEEELAKSRSSATSLRLERDKLAMEA
NFARERLDSYMKEFEHQRGENNGIQARNVEFSQLVVNYQRRLRESAEALHDAEETSRKLT
MEVSILKHEKEVLLNSEKRALDEVRNVMERVHRLQTSLDTIQSVEEVREEVRALERAKQE
EYTKQLEREWAEAKKELQEERDNVRTLTFDRENTLKNAMKQVEVMSKELADALRAAATAE
AKAAVAEARCSDLEVKIKSSKNKVAEVDGGYGASSNEMMMDLHKAKEEVEKLKEEAQANK
DHMLQYKNIAQVNEAALKQMESAHEKFKDESDRLKKSLEAELLLLRERVSELESDSISKS
KDAASVVAVKEVALDSALSEISSVKEAISVKQSQITGMEIQMSSLKEDLEKALQRWHTTQ
KNYERQVILQSETIQELTMTSQSLASLQEEASELRKLADAQKSENDILKTKWESEKSVLE
QSKNEAERKFTEINEQNKILHDRLEALHIKLAEKDRSSAGISSGSASPYTQGDGDLQNVI
SYLRRSKEIAETEISLLKQEKLRLQSQLDSALKASERAQSLLHTERASSRTMFTEAEFKS
LQLQVREMNLLRESNMQLREENKHNFEECQKLREEAQKAIVEIDHIKTLLSEKQVELDAC
HKEIEMQKIEKEQLEKRVSEVLEKCKNIDVQDYDRMKEAFHQIQVKLQEKEAEFEETKRL
VSEKQDIITRLEQELTNIRSDLTEKEKRIVDIESSFKLELDKQKKASTFYKKRIDSMNRE
KDELNKEKHALSRQLEESRQAAGKRPVVDATIEKAMKEKEKEKDTRIQMLEKTLERERED
LRKEREDNKKEKAKRQKTENAIYDLLQNINQEKKKLLDEFEKNKHARGHLAESTEASGAP
LPSESALDEQMAAYLTAVEHVEAAVNSNFGDALAARNLPAETSSLVDKSSTVTSGRLISA
LAPATKPSLGGTASSSRAKPTDERDKGTSLLKPSVETRKTGRRLVRPRLGRPQEPTVDVE
ISEMEGPSNSEETKPGPAHETETQGDPALPTQPATRKRLASSSASELHEDSLIQQETGSD
VQAQVLKKSRGSDSPQEGAEGQLSVPAENVQMTTAVEESFDAAGPHTTNEEAIDTEKDVE
ADETKEHSEEPKEPPLDIANQLEAQIDSNIVAEEILDKIGETDEVFNDGQPKDGEGHDPQ
HSMMEVESEKEEGELVPDVEQPSVEGDTMVMVNSPEPPEPGEGPETAVPITPIVGIEEEA
IVSTGIDAVETTSIEVLNDEKIEGGYVDQMEETAEGSDKSSNDQASDKSTNDQGSDKPNN
DHEISEMEQSSKGASGAVESSLPSVPTDAATKHSAADVSEPDEAKVDSKSTTINLTERAR
ERAVVRQLGMVSPSPPSRGRGRSAMVLRNRGSRGGRSGRGGRGQGSGEQE
NT seq
6273 nt
NT seq
+upstream
nt +downstream
nt
atgccgctattcctctcggacgaagagtttcagtggtgttcccacgatgcatctctggtg
gccgagaaggctgatgctttcatcagagaccttcatcgccaactcgagaccgtaaaagct
caggccgatgcctctgccataactgccgagcaaacctgtgcgctccttgagcagaaatac
attaccctctctgctgagttcggcaagctcgagtcccaaaatgctcaactcaacgccgtt
ctcgaacaacgactcacagagcttgccgaagttcaggccgagaagcaccagctgcatctc
aaagctattgctaaagatggagagatcgaacgtttgtcaactgaagtttctgagcttcat
aagtccaagcgacagttacttgaattattggaacagaaggatatagagattggtgagaag
aatgctaccattcagagctacctggacaagattgttaatatgaccggaaatgcttcccag
aaggaggctcggttgcgtgatagtgaagcagaattggcacgttgtcgtgctgcatgtgat
cgtctttcacaggaaaaggaacttattgagaagcataatgcatggcttaatgaagaacta
acggccaaaactggtgatcttcttaagttccgtaagacacatgccgaacttgaagcagat
acatctgctaagcttgatgatgttgagagacagttgaatgaatcttctagctccttaaag
tggaataaggaaagagtgagagagctggaactaaaactggcttctgtgcaggaggagttc
tgctcatgtaaagatgctgctgcgacaaatgaagagcgcttctctgcggaaattgctact
gtaacaaagcttgttgaattatacaaagagagttcggaagaatggtccagaaaggcagga
gaacttgagggtgtgatcaaggcactggaaatgcatttgagccaagttgaaaatgattat
aaagagaaacttgaaaaggaagtatctgtgaaaacagagattgaaaaggaggctggagtg
ttgaaagagaaactggagaagtgtgaagctgaaatggagaataatcggaaggctaatgaa
ttgagtattcttccaattggcagttttaccaaagaaatatgggtacgtggaactgaacct
gatgatagtagtgaggatagtcgcatgcttgttcctaaggttccagtaggtatttcggga
acagctttggcggcttcccttcttcgtgatggctggagtctagcaaaaatgtatgagaag
tatcaagaggctgttgatgcagtgcggcatgagcgattaggaagaaagcaatcacaagct
attctcgaacgggtcctttttgaaattgaggagaaagctgcactaattttggatgaacga
gctgagcatgagaggatggtagaagcatactctgtgatgaatgaaagattgcaagagtca
cttgccgaacaggctcagttagaaggctccatcagggaattgaaggctgagttaaagagg
catgaacgtgaccatagcttggcacaaaaagagattgttgaccttcagaagcaggtgacc
attcttctaaaggagtgccgtgatattcaacttcgttgtggatcagggagtgatatttat
gctgatgattctttgcttccacttgaaatgcatgatgagtctgatgctgaaagagtaatt
tcagaacggttgttgacttttaaagatataaatggattagtggagcagaatgtccagctc
cgaagtcttgttcgtagcttatcggaccagaatgagaaaataaatgcagagctacgggag
aagtttgaattggagcttcaaaggcatggtgaagaggctgccactaaagttttgactgtg
ttgaaaagagctgaggaacaagggcgcatgatagaatcgctccacagctctgtcgcaatg
tataaaagattatatgaagaggaacttaaacgtcatgcatcttatcctcattctactgaa
gctgtttcagaggatggaaggaaagatcttatgcttcttcatgaagtttctcaggaggct
acgaataaggcccatgaacaggcaactgaacgtgttaaaagtcttgaagaggagttggcc
aagtctaggagttcggctacgtcattacggctagagcgtgataagctggctatggaagct
aattttgcacgggagagacttgatagttatatgaaagagtttgagcaccagagaggtgaa
aataatggaattcaagccagaaacgtagagttctcgcagttggtagttaactatcaacga
aggctaagggagagtgcggaggctttgcatgatgccgaggaaacttcacggaaattaact
atggaggtttctatattgaagcatgaaaaagaagtgctcttgaattctgagaaaagagct
ttggatgaagttcgtaatgtaatggagagggtccatcgtcttcagacaagtttggacaca
attcagagtgttgaggaagttcgtgaggaagtcagagctttggaaagagctaaacaagag
gagtacacaaaacaacttgagagggaatgggctgaagcaaagaaagagcttcaagaagag
cgtgataatgttcgtactcttacctttgatagggaaaatacattaaaaaacgctatgaaa
caagtggaagtaatgagtaaggaactagcagatgcgctccgggctgctgctacagctgag
gccaaggcagcagttgctgaggcccgatgttctgatctagaggtgaagatcaaatcttct
aaaaataaggttgctgaagttgatggtggatatggtgcttctagtaacgagatgatgatg
gacctgcacaaagcgaaagaagaggttgaaaaactgaaagaggaggctcaagctaataag
gatcacatgctacagtataaaaatatcgcacaagtgaatgaagccgcattgaaacaaatg
gagtcagctcatgaaaagttcaaggatgagtcagacagattgaagaagtcactggaagct
gaacttcttttgcttagagaaagagtctcggaactcgaaagtgattctatatcaaagtcc
aaagacgctgcttctgtagttgctgtgaaggaagtggctctggattctgctttatctgaa
atcagcagtgtgaaggaagcaatttctgtgaaacagtctcaaattacggggatggaaatc
caaatgtcttcattgaaagaagatttggagaaggctctccaacgatggcacactactcaa
aagaattatgaaagacaggtcatcctacagtcagagacaattcaggagttaacaatgact
tctcaatctttggcatcactgcaagaggaagcatcagagttacggaaattggcggacgca
cagaaaagtgaaaatgacatactgaagacaaaatgggaaagtgaaaagtctgtgttggag
caatcaaagaatgaagctgagagaaaattcactgaaattaatgaacagaacaagatacta
catgatcgccttgaggctttgcacattaaattggccgagaaggaccgcagttctgctggg
atttcctctggaagtgcaagtccatatacacagggtgatggtgacttgcaaaatgtgatt
agttacctcaggagatcaaaggagatagcggaaacagagatctctctattaaagcaggaa
aagcttcgcttgcagtcacaacttgatagtgctttgaaggcatctgagagagctcaatca
ttgttacatacagagcgtgccagttctagaacaatgttcacagaagcggagttcaagtca
ctgcagcttcaggtcagagaaatgaatttgctccgtgaaagcaatatgcaacttcgagag
gaaaacaagcacaatttcgaggaatgccagaaattacgtgaagaagctcaaaaggctatt
gtggagattgatcacattaaaactctactgagcgaaaaacaagttgagcttgatgcctgt
cacaaagaaattgaaatgcaaaagattgagaaagaacagttggagaaaagagtttctgag
gtacttgagaaatgcaaaaatattgatgtccaggactatgatcgcatgaaggaagctttc
caccagattcaggtaaaattgcaagagaaagaagctgagtttgaggaaacaaaacggcta
gtttcggagaagcaggatatcataacacgcttggagcaagagcttacaaacatccggtct
gatctaactgaaaaggagaagaggatagttgatattgagagttctttcaaactggagctg
gacaagcagaagaaggcatcaactttttacaagaagaggattgattcaatgaatagagaa
aaagacgagctcaacaaagagaaacacgctctttcccgacagttagaagagtctagacaa
gctgcaggaaagaggcctgtagtggatgctacaattgagaaagccatgaaggagaaggaa
aaggaaaaggatacccgcatacagatgctggagaaaactcttgagagggagcgagaagac
ctgaggaaggagagggaagacaacaagaaagagaaagcaaaacgtcaaaagactgaaaac
gccatttatgatcttcttcagaatattaatcaggagaaaaagaagctgcttgatgagttt
gaaaaaaacaaacatgcaagaggccatctggcagagagtactgaagcatcaggggctcca
cttccttctgagagtgccttagatgagcagatggctgcatatttaactgctgtagaacac
gtagaagcagcagtaaattcaaattttggagatgctcttgctgcgcgtaatcttcctgcg
gaaacttcttcacttgtggataaatcgtctacagtgacttctggtcgtctgattagtgct
ctagctccagctacaaaaccttcactaggaggcacagcgagttcttcaagggctaagcca
acagatgagagagataaaggaaccagcttgctgaaacccagtgttgaaacacggaaaact
ggaaggaggttggttcgacctcgtcttggacgacctcaagagcctactgttgatgttgaa
atttcagagatggaaggaccctccaacagtgaggagacaaaacctggaccagctcatgag
acggaaactcaaggcgatcctgccttaccaacccaaccagctactcgcaaacgcttggct
tcttcatcagcatctgaattacatgaagattcactaattcagcaagagactggctctgat
gtgcaagctcaggtgctgaagaagtccagaggttcagactcccctcaggaaggtgctgaa
ggacaactttctgttcctgctgagaatgttcaaatgacaactgctgtggaggaatcattt
gatgctgctggtcctcatactacaaatgaagaggcaattgacactgaaaaggatgtcgag
gctgatgaaacgaaggagcattctgaggagccaaaggaacccccattagatatcgcaaac
caacttgaagcacagattgattcaaatattgttgcagaagagatcttggataagataggg
gaaacggatgaggtgtttaatgatgggcagccaaaggatggcgaagggcatgatcctcag
cactccatgatggaagttgaaagtgagaaagaggagggagagttggtgcctgatgtggaa
caaccttcagtagaaggggatacgatggtcatggtaaacagcccagaacctccagaacca
ggtgaaggtcctgaaactgcagttcccatcactcctatagttggcattgaggaggaagcc
attgtttctacaggaattgatgcagttgagaccacatctattgaggtgttaaatgatgag
aagattgaaggaggttatgttgatcaaatggaagagactgctgaaggttcagacaagtct
agtaatgatcaagcttcagataagtccactaatgatcaaggttcagataagcctaataat
gaccatgaaatcagtgagatggagcagagctcaaaaggtgcttctggtgctgttgaaagt
tctttgcccagtgttccgacagacgctgcaactaaacatagtgctgctgatgtttcagaa
cctgatgaagcaaaggtagattcgaagagcacaacgataaacttgacggagagagctaga
gaaagggctgttgtaagacaattaggaatggtatctccttcgccacccagtagaggacgt
gggagaagtgctatggttctaaggaatcgtggtagtcgaggtggacgcagtggacgaggg
ggacgtggtcaaggatctggcgaacaggagtag
DBGET
integrated database retrieval system
