Telopea speciosissima (New South Wales waratah): 122639659
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Entry
122639659 CDS
T07910
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122639659
Membrane trafficking [BR:
tss04131
]
Protein recycling
Others
Retriever complex
122639659
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
122639659
NCBI-ProteinID:
XP_043688478
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Position
9:4972519..5024354
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AA seq
920 aa
AA seq
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MEFKTRDYGAEEASHSLPRMRTDSHPLAVQSSLELVAVAFHEKIDLYDPLRALDADFGVS
AAEGNDVEYGSTRGSSNEAAIQRSAKEWASFKRSLMQRFAVAKTISISSMSDVIVKSGKE
YEKPPTRMHLEELDDPQKEAEADVKIITRQEYVSRLHELKDEISHAWRAEDRVTALKLSI
KVARLLMDTSVLQFYPTVFVLVTDVLDILGDMVWERIKRKAEYADDGTMICSLPDDFEAS
DVCSDAKETCNNWFCKIGSIRELLPRIYLELAIFCCWRFLHDRPWENLKRLVMMMRGLAD
PLASAYCHLYLARCAQKLPPHNIGYLVTCINDIKVRIILGRESMNGNSSEDRKMSVSLFE
PAIGWIIKCLLKDTDQMRLGDVLVELGLRPNVANPSVDFPCISVVLHHLLEELPAEVISS
NALEIMQLIERSEDYSFDKYLNYMLLGFKLCERIPLMDAVDAILVKVFQVVAQYDGLDEY
LKVVDAYLDIILHYQIGNYLTIILDGISDRACNKGVAESELGTLQSIFIKLLSHFDDLND
VLALNHFVEILDVMYGSTRNIVNTHILNKATRNGYIRDPTTVQLLFEISQALHDDIDFSS
IKDDDNQHPVHLISRFVRMVDFGAEMENHLIFLVECRGAFGSTNELKETLVHSSNYLAVK
AMKDAKKHISFLKSCIAFSEVTIPSISIIIRQMNLYLETAEVALLGGLVSHTDGLIDSTI
SCLQSLEVTNGCRTPVDLDGILSSVRKLCSLLILIPANPECGATYIPRNVLSKISSQSWI
TPRLRIRTFCAVVCLSTTLSQHKLPYHANSREVVGNDLLFFSEPSYYQELLSFSGSVVQN
LVDEVKQEPNQAARGSLALEACNCIISSFIANQEIVPICSKLIEIAKSCLNANNKYLHST
VNYLDKHFSTSTRGVPAVTT
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggaattcaaaactcgagattatggtgctgaagaagcatctcattcgctccctcgcatg
cggacggattctcatcctctggctgttcaatcttccttagagctggttgccgttgcattt
catgaaaagattgacctctatgatcctttgagagcattagatgcagattttggagtttca
gctgcagaaggaaatgatgttgagtatggatctacaagagggagctccaatgaagctgct
attcaacggtcagctaaagaatgggcgtctttcaagcgatcattaatgcaaagatttgca
gttgccaagacaatatctatttcctcaatgtccgacgtaatagtaaaaagtggcaaggaa
tatgagaaacctccaacaagaatgcatctagaagaactggatgatccacaaaaagaagct
gaggcagatgtcaagatcattacacggcaagagtatgtttcacgattacatgaacttaaa
gatgaaatatctcatgcttggcgagctgaggaccgtgtaacagctttgaaattatcaatc
aaggttgctagacttctgatggatacatctgttttacaattttatcctacagtctttgtt
ttagttacggatgtactggatatacttggagatatggtgtgggaacgcattaaaaggaag
gcagagtatgctgatgatggaaccatgatttgctccttgccagatgactttgaagccagt
gatgtttgctctgacgccaaagaaacttgtaataattggttctgcaaaattggttccatt
cgcgaacttcttccacgcatttacttggagctggcgatattttgttgctggcgtttcttg
catgaccgaccttgggaaaatctcaaacgcctagttatgatgatgagagggttagcagat
ccattggcatctgcatattgtcatctatatcttgcccgatgtgctcagaaattgccacca
cataatataggatatcttgttacttgtattaatgacatcaaagtgcggattattttggga
agagaatccatgaatgggaattcttcagaagatagaaaaatgtctgtcagcctgtttgaa
cctgccatcggttggattatcaaatgcttacttaaggatacagatcagatgcggttaggt
gatgtacttgtggaactgggattgcgaccaaatgtagcaaacccgtctgttgactttcca
tgtatatcagttgttcttcatcatctcctcgaggaacttccagctgaagtcatcagctct
aatgctttggagatcatgcagcttatagagcgcagcgaggattattcctttgataagtat
ttgaactatatgttgcttggatttaagctttgtgaaaggataccacttatggatgccgtt
gatgctatattggtcaaagtttttcaggtggttgctcaatatgatggccttgatgagtac
ttgaaggttgttgatgcttacttggatattattcttcactatcaaatcggtaattatttg
accatcattttagatggcatttcagaccgagcgtgcaataaaggagttgctgagagtgaa
ctaggcaccttgcagtccatttttataaagcttctttctcactttgacgacttgaatgat
gtgttggcattgaaccattttgttgagatcttagatgtgatgtacggaagcacccggaac
attgtcaatacgcatatccttaataaggcaaccaggaatggttatattcgtgatccaaca
accgtgcagttgctttttgaaatttctcaggctcttcacgatgatatagacttttcaagc
atcaaagatgatgataatcaacatcctgtacatctcatttctcgttttgtgcggatggta
gactttggagcagagatggaaaaccatttaatatttttggttgaatgtcgtggagctttt
ggtagcactaatgagctcaaggaaacccttgtgcactccagcaattacctagcagttaaa
gctatgaaagacgctaaaaaacatatcagttttttaaaatcttgcatagcgtttagtgaa
gttacaataccatcaatttcaattatcatcaggcagatgaatctttatcttgaaactgca
gaggttgctttattaggtggattagtttctcatacagatgggctaattgattcaacaatc
agttgtttacaaagtttggaagtaactaacggctgccgaacaccagttgacctagatgga
attctctcctcagtaaggaaattatgcagtctcttgattctgattccagctaatcctgaa
tgtggagccacttacatcccaaggaatgtattatccaaaattagttctcaatcatggata
actccaagattgaggatcaggacattctgtgcagtcgtttgtctatctacaacactatcc
caacataagctcccgtaccatgctaacagtagggaggttgtggggaatgacctattattt
ttctctgagccatcctattaccaagaacttctctctttctccggttctgttgttcagaac
ctggttgatgaagtaaaacaggagccaaaccaggctgctcgaggaagtttggcacttgaa
gcttgcaactgcatcatatcgtccttcatagcaaatcaagaaatagtaccaatatgctcc
aaattgatagagattgcaaagtcatgtctgaatgccaataacaaatatttgcattctaca
gtcaattaccttgacaaacacttttcaacttctacgagaggggtgccagcagttaccacc
tga
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