Telopea speciosissima (New South Wales waratah): 122639661
Help
Entry
122639661 CDS
T07910
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122639661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122639661
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122639661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_Zer-1
LRR_14
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
122639661
NCBI-ProteinID:
XP_043688487
LinkDB
All DBs
Position
1:complement(8963020..8976915)
Genome browser
AA seq
367 aa
AA seq
DB search
MFGEGSKIGDLESCFQKLVVFGGGEGKMGGGVLTEWKDLPMELLLRIVSLVDDRTVIIAS
GVCTGWRDAICLGLNQLCLSWCNNNMNNLVLSLAPKLTKLQTLTLRQNKPQLEDEAVETI
ANFCHDLQDLDLSKSFKLTDRSLYALAHGCPNLTKLNISGCTAFSDAALAYLTGFCRNLK
SLNLCGCIRAASDRALQAIACNCNQLQSLNLGWCEGVTDVGVICLALGCPDLRALDMCGC
VLITDESVIALADKCCHLRSLGLYYCQNITDRAMYSLANSRVKSKHDLWDSVKKGYSKDE
GLVNLNISQCTALTPSAVQAVCDSFPALHTCPGMHSLIKSGCLSLASVHCACSFQAHRAL
SLAHPAH
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtgaaggatcaaagattggggatttagaatcttgctttcagaagcttgtagta
tttggtggtggagaaggtaaaatgggtggtggagtgttgactgaatggaaggaccttccc
atggagctcttgttgcggattgtttcgcttgtcgacgatcggactgtgatcattgcttct
ggtgtgtgtactggatggagagatgctatttgcttaggcctcaatcagctgtgtctttca
tggtgcaacaacaatatgaacaaccttgtgctgtcacttgcccccaagttaacgaaactg
cagactctaactttgcgccaaaataaaccacagcttgaggatgaagcagttgagaccatt
gcaaacttctgccatgacctgcaggacttggatctcagtaaaagcttcaagctcactgat
cgctccttgtatgccttagcccatggatgtcctaaccttaccaaactcaatatcagtggt
tgtacggccttcagtgatgctgccctggcatatcttactggcttctgcagaaacttaaaa
tcgttaaatctttgtggatgcataagagctgcatctgacagagctctgcaggccattgct
tgtaattgcaatcagttgcagtctttgaatctgggttggtgtgagggtgtcactgatgta
ggagtgatttgtctggctcttggatgcccggatcttagggccttggacatgtgtggctgt
gtccttataacagatgaaagtgtgatagcattggcagacaagtgctgccatctgagatcc
cttggcctgtactactgtcagaacattacggacagagccatgtattctttagccaatagt
cgggtgaagagcaagcatgacttgtgggactctgtgaaaaaggggtacagcaaggatgaa
gggcttgtgaacctgaatatcagccagtgcacggctctcactccttcagcagttcaggct
gtgtgtgactcattccctgcgcttcacacatgtcctggaatgcattcccttataaagagc
ggctgtctcagtcttgcatctgtgcactgtgcctgttctttccaagcacatcgtgcgctg
agtttggctcatcctgcacactga
DBGET
integrated database retrieval system
