Telopea speciosissima (New South Wales waratah): 122639694
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Entry
122639694 CDS
T07910
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122639694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tss03041
]
122639694
Spliceosome [BR:
tss03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122639694
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
122639694
NCBI-ProteinID:
XP_043688530
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All DBs
Position
9:complement(55260768..55296545)
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AA seq
485 aa
AA seq
DB search
MATLADSFLADLDDLSDNEADIIDEDVGDEEGMEEDVDGDMPDIESLNYDDLDSVSKLQK
TQRYIDIMQKVENALEKGSDNPSQGIVLEDDPEYQLIVDCNALLVDMENEIIIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEENLKKTIDACDRALALDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
SALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYVEQTEIFQSTPPSLRMRACRLLAAK
STLASRVDSTRGDPTGKTGRTLRDEIRKKIEKWQEPPPAKQPKPLPVPDSDPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVAVGQSKLAT
KVAKKFKEKQYGSSGATSGLTSSLAFTPVQGIELTNPQANANQLGSGTQSTYFSEVGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttccttgcagaccttgacgatttatctgacaatgaagct
gatattattgatgaggatgtcggtgatgaggaaggcatggaagaagatgttgatggtgac
atgcctgacatagaatctcttaattatgatgatctagatagtgtttcaaaattacaaaag
acgcagcgttacattgatatcatgcagaaagttgaaaatgcgcttgagaagggttctgat
aaccctagccagggcatagttttggaagatgatcctgaatatcagcttatagttgactgt
aatgcattgctggttgacatggagaatgaaatcattattattcacaattttattcgtgat
aaatatcgcctgaagtttccggagcttgaatctcttgtacatcaccctattgactatgct
cgagttgtaaagaaaattgggaatgaagtggatttaacccttgttgatcttgaaggtctt
ttaccatctgctatcattatggtggtttctgttacagcatcaaccactagtgggaagcca
cttccagaggagaaccttaaaaagacaattgatgcatgtgatcgtgctcttgctcttgat
tcagcaaagaaaaaggttcttgattttgtagagagcagaatgggatatattgcaccgaat
ctttctgctattgttgggagtgctgttgcagcaaaacttatggggactgctggtggtctg
tctgcgttagccaagatgccagcttgtaacgttcagcttcttggtgccaagaagaagaat
ctagcagggttttcaactgcaacatcccaatttcgtgttggctatgttgagcaaacagag
atatttcaaagcacacctccttctttgaggatgcgtgcctgtcgacttttggctgcaaaa
tccacacttgcatcacgagtagattcaacacgaggagatccaactggaaaaactggaagg
acattgagggatgagatccgtaagaagattgagaaatggcaagagccacctcctgcaaag
caaccaaaacctcttcctgttccagattctgatcccaaaaagaagaggggtggtcgtcgg
ctccgaaagatgaaggaaaggtatgcaattactgacatgaggaaactggcaaataggatg
cagtttggagtacctgaagaaagttctttgggtgatggactgggagaagggtatggtatg
cttggtcaggctggaagtgggaagttacgtgtagctgttggtcagagcaaacttgctacc
aaggttgcaaagaagttcaaagaaaagcagtatggcagcagtggagccacttcagggttg
acgtctagtttggcatttacacctgtgcagggaattgagctcacaaatccacaggctaat
gcaaatcagctgggtagtggtactcagagtacctacttctcagaagtaggtacattctca
aagatcaagaggacttga
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