Telopea speciosissima (New South Wales waratah): 122639760
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Entry
122639760 CDS
T07910
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122639760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122639760
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122639760
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
DUF7885
F-box-like
LRR_NXF1-5
F-box
Motif
Other DBs
NCBI-GeneID:
122639760
NCBI-ProteinID:
XP_043688637
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Position
9:complement(10070368..10076866)
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AA seq
581 aa
AA seq
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MASKRRRDSPEEKERRVSPFPDEVLERVLGFVKSHKNRSSVSLVCKDWYSAERWSRTHVF
IGNCYSVSPEILVRRFPNIRSVTLKGKPRFSDFNLVPPNWGADIQSWLDVFASAYPHLEE
LRLKRMTIMDESLEFLAHSFPNFKALSLVSCDGFSTDGLATIATYCKNLTELDILENGIE
DLGGGWLSCFPENFTSLEILNFANLNSEVSFDSLERLVARCKSLKVLKANKNVTMEQLQR
LLSRAPQLMELGTGSFSQDLSFQQYEELKKAFKNCRNLHTLSGLWEATSLYLPALYPACA
NLTFLNLSYAALQSAELAKLLPSCPLLQRLWVLDTVEDKGLEAVGSSCPLLEELRVFPAE
PVVGGGGGVTESGFVAVSRGCRKLHYTLYFCRQMTNAAVATVVQNCPDFTHFRLCIMNPG
QPDYLTNEPMDEAFGTVVKTCSKLQRLAVSGLLTDLTFEYIGRYAKNLETLSVAFAGSSD
RGMQCVLEGCPKLRKLEIRDSPFGNAALLSGLERYESMRSLWMSACNVTMNACRLLAKEM
PRLNVEVIKEDESDDTQAEKVYVYRSVAGPRRDAPPFVLTL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaaaggagaagagattcgccggaggagaaggaaagacgtgtttctccgttc
cctgatgaagtcttggaacgtgttctgggtttcgtgaaatctcacaagaataggagctct
gtttctctagtttgcaaggactggtacagtgcggagagatggagccgaactcacgtgttc
attggcaactgctactctgtttcacctgagattcttgttcggagatttcccaacattcga
agcgtaaccttgaaagggaagcctcgattctcagatttcaacctcgtccctcccaactgg
ggggccgatatccaatcatggcttgatgtcttcgcctctgcgtatcctcatcttgaggag
ctgcgtcttaagaggatgactatcatggatgaaagcttggagtttcttgcccactcattt
ccaaactttaaagctctctcccttgtgagctgtgatgggttcagcactgatggccttgcc
accattgccacatattgcaagaacttgactgagctggacatactggagaatggcattgag
gatctcgggggtggttggttaagttgctttcctgaaaacttcacatcattagaaatactg
aactttgcaaatttgaacagtgaagtcagttttgattccctggagaggcttgttgctaga
tgcaaatcattgaaggttttgaaagcaaataagaatgtgactatggaacaattacaaagg
ctgctgtcgcgagctcctcaattaatggaactgggaactggctcattctcgcaagatctc
agttttcagcagtatgaagaactcaaaaaagcattcaaaaactgccgaaacttgcacaca
ctctcaggtttatgggaagccacttccctttatctcccagccctgtatcctgcatgtgcc
aatctgacgttcttgaatttgagctatgctgccttacaaagtgctgaacttgctaagctc
ctccccagttgcccacttcttcagcgtctctgggtcctggacactgtagaagacaaaggg
cttgaggctgttgggtccagctgccctttactcgaggagcttcgtgtctttcctgcagaa
cctgtggtggggggtggtggaggggtgacagaatctggctttgtagcagtctcccgcggc
tgccgtaaactacactatactctctacttctgccgacagatgaccaatgctgctgtggct
acagtagtgcaaaactgccctgacttcacccacttccgtctctgcatcatgaaccctggc
cagccagattatttgactaatgaacctatggatgaagcttttggtaccgtggttaagaca
tgcagcaaacttcagaggcttgcagtctctggtctactgactgacctgacttttgagtac
attggaagatatgctaagaacttggagacattatctgtggcattcgcaggcagcagtgac
agggggatgcagtgtgtgctagaaggatgtccaaagctacggaaacttgagatacgtgat
tccccctttgggaatgccgctctgttgtcagggctggagaggtatgagtcaatgaggtcc
ctgtggatgtcggcctgcaatgtgacgatgaatgcatgtaggctgctggctaaggagatg
ccaaggttgaatgtggaggtgatcaaagaggatgagagtgatgacactcaggctgagaag
gtctatgtttatcgctctgttgcagggccaagaagggatgcccctcctttcgttctcacc
ctctga
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