KEGG   Telopea speciosissima (New South Wales waratah): 122639790
Entry
122639790         CDS       T07910                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122639790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tss03041]
    122639790
Spliceosome [BR:tss03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122639790
 Complex B
    122639790
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 122639790
NCBI-ProteinID: XP_043688685
LinkDB
Position
9:complement(12809101..12834971)
AA seq 554 aa
MSGYSSRYDGNGEGYTSASYAQNKGVDNGGSSPYDVFEDRDSQPKYASRGSDHERSRTRE
SNRDREKDRDRHHRDYKDRSMREERGRDKYDDYDRHRSHDYDRHHDYDRDRDRRHRHRSR
SRSRDKSRNRSRSRSRSRSKSKRTSGFDMAPPGTAVLPIAAATGQLPGVSQTSPGTFPNV
YPMGTAQFGAIPVPIQAMTQQATRHARRVYVGGLPPMANEQTIATFFSQVMAAIGGNTAG
PGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPTDYNPSLAAALG
PSHPSPNLNLAAVGLTPGAIGGAEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVK
DRDTGNSKGYGFCVYQDPASTDVACAALNGLKMGDKTLTVRRATASSMQAKPDQEIILAQ
AQQQLAMHKIALQVGGVNISEVAMAPRGPMETPTKVVCLTEVVLADELRDDEEYEEILED
MREEGGKFGSLVNVLIPRPNPSGIPTPGIGKVFLEYVDTAGSAKAKAALNGRKFGGRTVV
AIYYPEEKYFNGDL
NT seq 1665 nt   +upstreamnt  +downstreamnt
atgtctggttacagtagtcggtatgatggcaatggcgaaggttacacgtcggcgtcttat
gcgcagaacaaaggagtcgataatggaggatcttctccttacgatgtattcgaagataga
gactcgcaacccaagtatgcttcccgtggatcagatcatgagagatcaaggactagggaa
agcaatcgggatagggaaaaggatcgtgatcgccatcatagggactacaaggatagaagt
atgagagaagaaagagggagagataaatatgatgattatgaccgtcatcgaagccatgac
tatgacaggcaccatgattatgatcgagatagagataggagacatagacatagatcaaga
tcccgttcaagagataaatctaggaaccgatctagatcacgctcccggtctcgttcaaaa
agcaaaaggacaagtggttttgacatggcaccacctggtactgccgtgctgcctattgct
gctgctacagggcaattaccaggtgtttctcagacatcgcctggaacattcccaaatgtg
taccccatgggaactgcacagtttggggctattccagtgcctattcaagctatgacacag
caggccacaaggcatgcacgccgagtatatgttggtggccttcctcccatggcaaatgag
cagacaattgcaacattttttagccaggttatggctgctattggaggaaatactgcaggt
ccaggtgatgctgtggtcaatgtgtacattaatcatgaaaagaagtttgcttttgtggag
atgagaactgttgaagaagcaagtaatgcaatggcattagatgggatcatattcgagggg
gtgtctgtaagggttcgaaggcctactgactacaatccttcattggctgctgctcttgga
cctagccatccaagccctaatctcaacctagctgctgttggtcttacaccaggagcaatt
ggtggagcagaaggaccagatcgtatatttgttggtggattaccatactattttacggag
gcacaaataagagaacttctagagtcatttgggccgctgcggggatttgaccttgtcaag
gatagagacactgggaactcaaaaggttatggtttttgtgtatatcaggatccggcatcg
acagatgttgcttgtgctgcacttaatggtcttaaaatgggtgataagactcttactgta
cgccgtgccactgccagcagcatgcaggcaaaaccagatcaggaaattatattagcacaa
gcacagcagcagctcgctatgcataaaatagccctgcaggttggtggcgtaaatatatct
gaagttgcaatggcacctagaggtcctatggagactcctactaaagtagtttgcttgact
gaggtagtattggctgatgagctgagggatgatgaagagtatgaagaaatattggaggac
atgagggaagaaggcgggaagtttgggtccttggtgaatgttctgatccctcgaccaaat
ccaagtggaataccaacccctggaattggaaaggtgttcttggagtatgtagacacggct
ggttccgctaaggccaaggctgctctcaatgggaggaagtttggaggtagaactgttgtc
gccatttattatcctgaagagaaatattttaacggagacttgtga

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