Telopea speciosissima (New South Wales waratah): 122639876
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Entry
122639876 CDS
T07910
Name
(RefSeq) protein argonaute 16-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122639876
03036 Chromosome and associated proteins [BR:
tss03036
]
122639876
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122639876
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122639876
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122639876
microRNA pathway
RISC loading complex
122639876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Microp_apicomplexa_17
Motif
Other DBs
NCBI-GeneID:
122639876
NCBI-ProteinID:
XP_043688821
LinkDB
All DBs
Position
9:complement(3778701..3787389)
Genome browser
AA seq
904 aa
AA seq
DB search
MEKAEVQDKGGDSVLPPPPPCIPPNVKPEKMEIAKRSAIIRPGFGSNGRRIQLLTNHFKV
NMNAPDGVFFQYSVSITYEDKRPVEGKGIGRKVIDKLYQTYCSELAGKNFVYDGEKSLYT
VGPLPQNNFEFTVVLEDSSLRRNGSPGLNGSPSEADRKRSKRSYQSKTFNVEINFATKIP
LKSIASAIKGNEVGSTQDALRVLDIILRQQAANSGCLLVRQSFFHDDVRNLTSVGGGVSG
CRGFHSSFRTTQSGLSLNMDVSTTMILTPGPVIDFLTANQNVRDNRQIDWAKAKKMLKNI
RIKTRHSNMEFKITGLSEKPCNQQFFTLKVKNGDGANGEDQTMEVTVYDYFTQHRKMELT
YSAYMPCLDVGKSKRHNYLPLELCSLVSLQRYTKALSSMQRSSLVERSRQKPQERIQVVT
DAVKNYRYDEDPVLASCGIFIEKKLTAVDGRVLDAPTLKVGNNEDCVPRNGRWNFNHKRL
LNPTRIDRWVVVNFSARCDMSHLSRELINCGRNKGIHIERPYTLIEEDPQWRRAGPVARV
EKMFEQIRAKLPGPPQFLLCVLPERKNSDIYGPWKRKNLHEMGIVTQCISPTKINDQYLT
NVLLKINSKLGGTNSLLAIEHSPCIPFIKDTPTMILGMDVSHGSPGRSDVPSIAAVVGSR
SWPLISRYRAAVRTQSPKVEMIDSLYKPLANGDDDGIMRELLTDFYQSSQSRKPEQIIIF
RDGVSESQFNQVLNIELEQVIKAFQHLGETWLPKFTVIVAQKNHHTKIFQAGAPENVPPG
TVVDTKVVHPRNYDFYMCAQAGMIGTSRPAHYHVLLDEIGFTADDLQSLVHSLSYVYQRS
TTAISVVAPVCYAHLAAQQMGQFIKFEDFSDTSSGHGGVTSAGSISVPELPRLHKGVQSS
MFFC
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagcagaggtacaggacaaaggaggagattcagttctgcctcctccacctcca
tgtatacctcctaatgtcaagcctgagaaaatggaaattgcaaagcgttcagctatcatt
agacctggttttggaagtaatggacgccgtatacaattgcttacaaaccatttcaaagtt
aacatgaatgctccagacggagttttctttcagtatagtgtctctatcacctatgaagat
aaacgacctgttgaaggcaaggggattggtagaaaggttattgataaactctaccaaaca
tattgttcagaacttgcagggaagaactttgtttatgatggagagaaaagcctgtataca
gtgggtcctcttccccaaaacaattttgagtttacagttgtgcttgaggattcttctctt
aggcgtaatggcagccctggtttgaatggcagccccagtgaggctgaccgtaaacgatca
aagcgttcatatcagtcaaagacctttaatgtagagataaactttgctacaaaaattccc
ttgaagtcaattgcttccgctatcaaaggaaatgaagtgggtagcactcaagatgcactg
agggtgctagatattattcttagacaacaagcggctaacagtggatgccttctagttaga
caatcctttttccatgacgatgtgaggaacttaacaagtgtaggcgggggagtaagtggt
tgccgagggttccactcgagtttccgtaccacacagagtggtttgtccttgaatatggat
gtttctacaacaatgatattgactcctggtcctgttattgattttttaactgccaaccag
aatgtaagggataaccgccagattgactgggcaaaggccaaaaaaatgctgaaaaatata
aggatcaagactaggcacagcaatatggaattcaaaattacaggattgagtgagaagccc
tgcaaccagcaatttttcacactgaaagtgaaaaatggagatggtgctaatggtgaggac
caaacgatggaggttactgtttatgattattttacccaacaccgtaaaatggagctaacg
tactctgcatacatgccctgccttgatgttggtaaatcaaagcggcacaattaccttcca
ctggagctctgttcacttgtgtcactgcaaagatatacaaaggcactatctagcatgcag
agatccagcttagtcgaaagatcaaggcaaaagcctcaggaacgcatacaagttgtgact
gatgctgtgaaaaattaccggtatgatgaagatccagtgcttgctagttgtggaattttc
attgaaaaaaagcttactgcagttgatggtcgtgttcttgatgcaccgacgttgaaggtt
ggtaataatgaagattgtgtccctcgaaatggacgatggaactttaatcacaagagacta
ttgaaccccactcgaattgatcgatgggtagttgtcaacttctccgcccgttgtgatatg
agccatctctctcgggaacttatcaactgtggaagaaataaagggattcatattgagcgc
ccatatacattaattgaagaagatccccagtggaggagagctggccctgttgcaagggtt
gaaaagatgttcgaacagattagggctaagcttcctgggcctcctcaatttcttctatgt
gtacttccggagcggaaaaattctgatatttatggcccttggaagaggaaaaacctacat
gaaatgggtattgtcacacaatgcatctcccccacaaagatcaatgatcagtacctgaca
aatgttcttctgaaaataaattccaagcttggaggtacaaattcattattggcaattgag
cattctccatgcattccctttataaaggacactcctacaatgatcttgggaatggatgtt
tcccatggttctcctggtcgttctgatgtcccatccattgctgcggtcgttggttccaga
tcatggccattgatatcaaggtacagggcagcagtaagaactcagtctccaaaggtggag
atgattgactctctatacaaaccactagcgaatggagatgatgatggcattatgagggag
ttactgacggacttctatcagtcgagccaatcacgcaagccggagcaaatcattattttt
agggatggggtcagtgaatcccaatttaaccaagttttgaacattgagctggagcaagtc
ataaaggcatttcaacatttaggtgagacttggcttcccaaattcactgtgattgtggct
cagaaaaaccatcacacaaagatcttccaagctggtgcccctgaaaatgtgccacccggg
acagttgtggatacaaaagttgtacatccgaggaactatgacttttacatgtgtgctcaa
gctggaatgataggaacatcacgtccagcacactaccatgtcctgcttgatgagattggt
ttcactgccgacgatctgcaaagccttgttcattcactctcctatgtgtaccagaggagc
acaactgctatttcagttgtggctccagtctgctatgctcatcttgctgctcaacagatg
ggccagtttattaagtttgaggatttctcagatacttcctcaggacatggcggagtcaca
tcagcagggagtatctctgttcctgagctccctaggttgcacaaaggcgtccaaagttct
atgttcttttgttga
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