Telopea speciosissima (New South Wales waratah): 122639941
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Entry
122639941 CDS
T07910
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122639941
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
122639941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
122639941
NCBI-ProteinID:
XP_043688928
LinkDB
All DBs
Position
9:complement(57608073..57670480)
Genome browser
AA seq
1991 aa
AA seq
DB search
MWTNVFKIGGLHHISWFQFLPFESDPSTLPEKSVKAQQKDAATLLVLSAHLQLQKEGFLS
TWTNSFVGPWDPSQGMHNPDEKIKLWLFLPGRHSSVIESSQAAVSRLRVVGSGLWLAPGD
SEEVATALSQALRNCIERAMRGLSYVRFGDVFARCHSFSQSEKLFRRVQPTVEFIFAATE
EAIFVHVIISAKHIRTLSGDDMERVLGHLSSKKSGGRLPVIVAPHGMRGRLTGCCPSDLV
KQVYFGSSKVRSSNGFPVPGIPLQVQGSGCQLRGQSCYVEVTLGCPGNGSDKEFRSLSNS
NGKFSKPHLAEAPAAALGRGDLKQGSSDNSPVLERTFIYPSEAVLVPVMHTIFARSSLKR
FWLQNWARTSLFGSSFFMDCLETAGKIESIDGPWSEVNGIHSLHSYNSSSNSNSSSISSI
SSTSSESDYRTTTGTGDLEADADSLTCKQSDLSSNDQFENDGQKLVSKRPRMGMTDSFVQ
SGTGIISSMQEAYKSGYNSIEVNNSAIAGVVNDSIGSHWLDDEDRGIGMDIQILLSEFGD
FGDFFIDDALPFGEPPGTAESQALMFPVADSGDVSGSPCTVGMDVTDQMFVSGFPSFDGF
TAPPPVVMDESQSINQEVIQSAAPGSFSAAPSTSEFDHLSKAEAIMTFAEEYRAVATHAT
DLPSSIFRSPYMPSSRKLDSSHSTSCVYVYGAMPPPSSCLDVSDEKLSVPANSKADPGGH
EASFTQYSNKFYTLVEWGKEKLDGRSLTCNNSAASCEVVTPSSSVSGFSSANAAILFQKK
NESTFEAGHLLLSSKTVLATEVECIMFQASMCRMRHMLLSLSTVLPTGLSRLTSSAILDQ
LPGDPSTTGDKFSSKYEVKKKECIPVRIAGDVDGGILDGPVNAPVGVWRSVGVPKGAKST
NSPSIDNTPSLHHTLFNEEGMVTYSHKQPVEELLDAMALLVQQATSFVDVALDADHGDGV
YGWLALQEQCRRGFPCGPSMVHAGCGGVMASCHYLDIAGSELLDPLSADVSASSVISLLQ
SDIKAALKSAFPNMDGPLSVTDWCRGRSQSGDAGTVCDGYSAESSLSESKDASSAVTLAI
GEPISPSQSSTGGSSGPKVSSTTDGARAEETCQRRSNPEICGSETEMQISFPRLRPTLYV
LPFPAILVGYQDDWLKTSASSLQLWEKAPFEPYALPKPMTYYVICPDIDPLVSASADFFQ
QLSTVYETCKLGTHAPQNVGGQLDQASGKGSPCGFVFVDCPQSTKIENSNASIMGSISDY
LLSLSNGWELASFLKSLSKVLKALKLGSNLSTNQKDSVSGPCTVIYVVCPFPDPIAILQT
VIESSSAIGSVVLSSDKERRSSLHTQVGKALSCSTAVDESSTSNVVTISGCSIPKLVLQI
VTVDSVFRVTSPALNELVLLKETAFTVYNKARRISRSSFGDVQSSGISGKPSATLMHMSS
IPGMWKDCVPRITGTSLPREGELDSGLRPGAWDNSWQSSRGGGLGCDPNRSGDFLLQDDA
RCLFEPLFILAEPGSVEHGLMPTVFGNETSESTRASTDDSAGAGFMQGSSSVGSMDIGSN
SLLDGSESEGCSNQKTASLHCCYGWTEDWRWLVCIWTDSRGELLDSHIFPFGGISSRQDT
KGLQCVFVQVLHQACQMISCSSPEVGNAKCRDIVITRIGSFFELECQEWQKAIYLVGGNE
VKKWPLQLRRSSPDGIPTSSSGTSLQQQEMSFQERTLPSSPSPLYSPHTKASTYMKGVLG
QNNTRKQLMGGQMSVDSSRGLFQWVQSISLVGVSLDHSLHLVFHADISSPGGGAQGGSSI
APSSYLEGFSPVKSLGSTSATYILIPSPSMRYLSPMPLQLPTCLTAESPPLAHLLHSKGS
AIPLCTGFVVSKAVASIRKDSRSSSKDEWPSVLSVSLVDYYGSNNIIREKIARGSIKHGR
SLSSEGRDFEIESHLILESVAAELQALSWMTASPTYLDRRTALPFHCDMLLRLRRLLHYA
DKELSQQSEKS
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgaatgtcttcaaaattggaggtctacatcacatttcctggttccagtttcta
ccttttgaatctgatccaagcaccctgccggagaaaagtgtgaaagctcagcagaaagat
gctgctacgttgttggtgctttcagctcatctgcaattgcagaaggaaggatttcttagc
acatggaccaattcctttgtcggtccctgggatccatctcagggaatgcacaaccctgat
gagaaaatcaagctctggctttttcttcctggacgtcattcatctgttattgaatcttcc
caggctgcagtgtccagattaagagttgttggatctggactctggttggcccctggtgat
tcagaagaggttgctacagctttatctcaggctctacggaattgtattgaaagggcaatg
agagggctttcttatgtgagatttggagatgtatttgcgaggtgccattcattttcacaa
agtgaaaaacttttcaggagagtgcagccaacagttgagtttatctttgcagccactgaa
gaggcaatcttcgtgcatgtcataatatctgcaaagcatatcaggactctttctggtgat
gacatggagagagtattgggacacctctcttctaagaaatctggaggaaggcttccagtt
attgttgctcctcatggaatgcgaggaaggctgacaggatgctgtccaagtgatcttgtg
aaacaagtttacttcggttctagcaaggtcaggtcttcaaatggattccctgttcctggc
atacctcttcaagtgcaaggctctggttgccaacttagggggcagagttgctatgttgag
gttacccttggctgtcctggtaatggaagtgacaaggaatttaggtcactctctaattcc
aatgggaaattttccaagcctcatcttgctgaagcacctgcagcggctcttggcaggggt
gatctgaagcaaggatcatcagacaattctcctgttcttgaaagaacattcatttatcca
tctgaggcagtccttgtcccagtcatgcacacaatatttgctagatcttctctgaagaga
ttctggctacaaaattgggcacgtacatctctttttggttcctctttctttatggattgt
ttggaaactgctggcaagatcgagtctatcgatgggccatggagtgaggtcaatgggata
cactcacttcacagttataacagcagtagtaacagtaatagcagtagcatcagcagcata
agtagcacatccagtgaaagtgattataggaccacaacggggactggtgaccttgaggca
gatgctgattcactaacatgtaaacagtctgatttatcttctaatgatcagtttgagaac
gatggccagaaactggtttctaagcgtcctcgcatggggatgactgattcatttgttcag
tcaggaacaggaataatttcgtccatgcaagaagcatataagtcagggtataattccatt
gaagttaacaactcagccatcgcaggagtggtaaatgattctataggatctcattggtta
gatgatgaagacaggggtattggcatggacatccaaatacttctttctgagtttggggat
tttggtgacttttttattgatgatgctctgccttttggtgagcccccaggaactgcagaa
tcacaagctctaatgtttccagttgcagactcaggagatgtaagtggtagtccttgtact
gtagggatggatgtaacagatcaaatgtttgtatctggatttccatcttttgatggcttt
actgcacctcctccagttgttatggatgagtcacagagcataaatcaagaagttattcag
tcagcagctccaggaagtttttctgcagcaccctccacaagtgagtttgaccatttgtct
aaagctgaagccattatgacattcgctgaagaatatagagctgttgcaacccatgcaacc
gatttgccctcgtcaattttcagaagcccatacatgccaagttctaggaagttggatagt
tcacattcaacctcatgtgtttatgtatatggtgcaatgccgccgccttcttcttgttta
gatgtctcagatgagaagcttagcgtgccggcgaattcaaaagctgatcctggggggcat
gaagcaagtttcactcaatactcaaataaattttatactcttgttgagtgggggaaagag
aagcttgatggtagatcattgacttgtaataatagtgctgcttcttgtgaggtggtaaca
ccatcttcttctgtttctggtttcagttctgcaaatgctgcaatacttttccagaagaag
aatgaaagcacatttgaagcaggacacctgttgttgtcttcaaagactgtgcttgctact
gaagttgagtgcatcatgttccaagcttctatgtgcaggatgcgtcacatgctgttatca
ttgagtactgtgctacctactgggctgagtagattaactagcagtgctattttggatcag
ctcccaggggacccaagcacaacaggagacaagttttctagcaagtatgaggtaaagaaa
aaggaatgcataccagttagaatagcgggtgatgttgatggaggaatacttgatgggcct
gttaatgcacctgttggtgtttggcgttctgttggggttcccaaaggggctaagtccaca
aattcaccaagtattgacaatacaccatctttgcaccatactcttttcaacgaggaaggt
atggtgacatattctcacaaacaacctgttgaagagcttctggatgctatggccttactt
gtccaacaagctacttcatttgttgatgtggcactggatgctgaccatggcgatggtgta
tatggttggcttgcactacaagaacaatgtaggcgtggatttccttgtgggccttctatg
gtccatgcaggctgtggtggagttatggcttcttgtcattatctggacattgctggctca
gaattacttgacccactttctgctgatgttagtgcatcatctgtaattagcttgctacag
tcagatatcaaagctgctctaaagtctgcatttccaaatatggatggcccattatcagta
actgattggtgcaggggccgcagtcaatcaggcgatgcaggtactgtgtgtgatggatat
tctgctgaatccagtttaagtgaatctaaagatgcttcaagtgctgttactttagccatt
ggggaaccaattagcccatcacagtcatcaactggtggttcttctggcccaaaagtgtct
agcacaactgatggagccagagcggaggaaacgtgtcaaagaagatcaaacccagaaatt
tgtggttcagagacagaaatgcagattagctttcctcgtctcaggccaacactatatgtg
cttccattccctgctatacttgttgggtaccaggatgattggctgaagacatcagcaagc
tctctacaactatgggaaaaggctccttttgaaccatatgctctgccaaaacccatgact
tattatgttatatgtccagacattgatccccttgtctctgctagtgctgatttttttcaa
caattaagcaccgtttatgaaacatgcaaactgggaactcatgcaccgcaaaatgtggga
ggccagttggaccaggcctcagggaaaggttcaccttgtggttttgtttttgttgattgt
ccccaatcaacgaagatagaaaacagtaatgcttctattatgggctcaataagtgattat
cttttgtctttatcaaatggctgggagttggcaagctttcttaagtctctctccaaggtt
ctcaaggctctcaaacttggttcaaatttgagcacaaatcaaaaagacagtgttagtggt
ccttgcacggtaatctatgtggtgtgccccttccctgaccccattgcaattcttcagact
gtgatagagtcttccagtgccatcgggtcagtagttctctcatctgataaagagagaagg
tcttcattgcacactcaggttgggaaggctttaagctgctcgacagctgtggatgaatca
tcgacgtcaaatgttgtgacaatttcagggtgtagtattccgaaattggtcttgcagatt
gtgactgtagattctgtttttagagttactagtcctgctcttaacgagcttgtccttctc
aaggagactgcattcacagtttacaataaagcccgccgtatttctcggtcatcttttggt
gatgtgcaatcatcgggcatctcaggtaaacctagtgcaactttgatgcatatgtcctct
atcccagggatgtggaaggactgtgttcctagaattactggaacatcccttccaagagag
ggtgaacttgattctggcttgagacctggggcttgggataattcttggcaatcatcaagg
ggtggaggactaggctgcgatccaaacagatctggagattttcttcttcaagatgatgcc
cgatgtttgttcgaaccactttttattctggctgaacctggctctgtggagcatggactt
atgcccacagtgtttggtaatgaaacatcagagtctacaagggcttctacagatgatagt
gctggtgctggcttcatgcagggttctagctcagtaggaagtatggatattggatcaaac
tctcttcttgatggatcagagtctgaaggatgcagcaatcaaaagactgcaagccttcat
tgttgctatgggtggactgaggactggcgttggttagtctgcatctggacagattccagg
ggagaattgcttgacagccacatatttccttttggtggaatcagtagtcggcaggacaca
aaggggctacaatgtgtttttgttcaggtgctccaccaagcttgtcagatgatatcatgt
tcttcccctgaggttggtaatgctaagtgtagagatatagttatcacacgcattgggtcc
ttcttcgagctagaatgccaagaatggcagaaagccatctacttggttggtggaaatgaa
gtgaagaagtggccgctacaacttcgacgatcttcacctgatgggatccctacaagcagt
agtgggacttccttacagcaacaggagatgagttttcaagaaagaaccctaccttcctca
cccagtcctctatacagtcctcacacaaaagcttctacttatatgaaaggtgttttaggg
cagaacaatacaaggaagcagcttatgggtgggcaaatgtcagttgacagttcaaggggg
ctgtttcagtgggtgcagagtatcagtttggttggggtgtcccttgaccattccctgcat
ctagtctttcacgctgatatttcttcccctgggggaggagctcaaggtggcagtagtatt
gcaccatcaagctatttggaaggtttcagccctgtcaagtctcttggatctacatcagca
acctacattctaatcccttcgcccagcatgcgctacctctctccaatgcctctacagctc
ccgacgtgcctcaccgctgaatctccacctctggcccatctcttacatagtaaaggctca
gctattccattatgcactggatttgtggtgtcaaaagcagtagcgtctatcaggaaggat
tccaggagtagctcaaaggatgaatggccttcagtcctatcagtcagtcttgttgactac
tatggcagtaacaacatcatcagagagaagattgctagaggatctataaagcatggtagg
agtttaagctcggaaggaagagactttgagattgagagtcatttaattcttgagtctgtt
gcagcagagcttcaagctctgtcttggatgacagcgagcccgacatatttggacaggcga
actgcattgccttttcactgtgatatgcttttgaggctgagaagactgcttcattatgct
gataaggagctctctcagcaatctgagaagtcatag
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