KEGG   Telopea speciosissima (New South Wales waratah): 122639997
Entry
122639997         CDS       T07910                                 
Name
(RefSeq) cullin-4-like
  KO
K10609  cullin 4
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03420  Nucleotide excision repair
tss04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122639997
  09124 Replication and repair
   03420 Nucleotide excision repair
    122639997
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tss04121]
    122639997
   03400 DNA repair and recombination proteins [BR:tss03400]
    122639997
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tss04147]
    122639997
Ubiquitin system [BR:tss04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     122639997
DNA repair and recombination proteins [BR:tss03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      122639997
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      122639997
Exosome [BR:tss04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   122639997
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 122639997
NCBI-ProteinID: XP_043689006
LinkDB
Position
9:complement(45026626..45104622)
AA seq 829 aa
MSQSHHNNKRPNCNSSSSGGGGGPFQTMKKAKSQPVTFSIEKNGINQQQQQQNQNHFVSE
IDESSMIVDEDLKADASDVSPMALGVGCSGTSTGVAANLSRKKATPPQPAKKLVIKLVKA
KPILPTNFEEDTWAMLKSAISAIFLKQPNPCDSEKLYQAVYELCLHKMGGNLYQRIEKEC
EAHISAALQSLVGQSPDLVVFLSLVEKCWQDLCDQMLMIRGIALYLDRTYVKQNPNVRSL
WDMGLQLFRKHLSLSPEVEHKTVTGLLRLIEKERLGEAIDRTLLNHLLKMFTALGIYSES
FEKPFLECTSEFYASEGVKYMQQSDVPDYLKHVESRLHEEHERCILYLDASTRKPLVATA
EKQLLERHTSAILDKGFTMLMDGNRIEDLRRMYTLFSRVNALESLRQALSSYIRGTGQGI
IMDEEKDKDLVPCLLEFKASLDTIWEESFSRNESFSNTIKDAFEHLINLRQNRPAELIAK
FLDEKLRAGNKGTSEEELENTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDA
EKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPTGIELSVHVLTT
GYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGRKELA
VSLFQTVVLMLFNDAHKLSFQDIKDSTGIEDKELRRTLQSLACGKVRVVQKIPKGRDVED
NDSFVFNEEFSAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVL
SHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKSNPQIYNYLA
NT seq 2490 nt   +upstreamnt  +downstreamnt
atgtctcagtctcaccataacaacaagcgcccgaactgtaacagcagcagcagcggcggc
ggtggtggcccttttcagaccatgaagaaagccaagtcgcagccagtgactttctctatt
gagaagaacggaattaatcagcaacaacagcagcagaatcagaatcatttcgttagtgaa
atcgacgagtcctcgatgattgttgatgaggatctcaaggctgatgcttccgatgtatct
cccatggccctcggtgttggttgtagcgggacgtctacaggtgtcgctgccaatttgtca
aggaagaaagccacgccgcctcagcctgcaaagaaactcgttatcaagcttgtcaaagcc
aaaccgatacttcctaccaattttgaggaggatacatgggcaatgttgaagtcagctatt
agtgctatctttttgaagcaaccaaacccttgcgattctgagaagctttatcaggctgtt
tatgaactctgcttgcacaagatggggggaaatctttatcaacgaattgagaaagaatgt
gaagcacacatttctgcggccctacagtcattggttggccagagcccagatctggtggtt
ttcttgtctcttgtagagaaatgttggcaggatctttgtgaccagatgttgatgattcgt
ggtatagcactttatctcgacaggacatatgtgaaacaaaacccaaatgtgcgctcgctg
tgggatatggggttgcaattgttccgcaagcatctttctttgtctccagaagttgagcac
aaaacagtcactggccttttaagattgattgaaaaggaaagattaggtgaagctattgat
aggacactgcttaaccatcttttgaagatgtttactgctctaggaatctactcagaaagc
tttgaaaagccatttcttgagtgcacatctgaattctatgcttctgagggtgtgaagtac
atgcagcaatccgatgttccagattacttgaagcatgtggagtcaagattacatgaagaa
catgaaaggtgtatactctacttagacgcaagtacaaggaagccactagtggcaactgca
gagaagcaacttcttgaacgtcacacttctgcaatacttgataagggattcacaatgctg
atggatggaaatcgaattgaggaccttcggaggatgtacactctgttttcaagggtcaat
gcccttgaatcactgcggcaagcccttagttcttacatccggggtactgggcaggggatt
atcatggacgaagagaaagacaaagatctggtgccctgtctcttagagtttaaggcttct
cttgatacaatctgggaagaaagcttctcaaggaatgagtcattttctaacaccataaag
gatgcatttgagcatctcattaatctccgtcagaaccgtcctgcggagcttattgctaag
tttctggatgaaaagcttcgtgctggtaacaagggtacatctgaagaggagcttgagaat
acacttgataaagtcctggttttattcagatttatacaaggtaaagatgtttttgaagca
ttctataagaaggatcttgccaaaaggttgcttttaggaaagagtgcctcaattgatgca
gagaagtcaatgatttctaagctgaagactgaatgtggcagccagtttaccaataaactt
gaaggaatgtttaaggatattgagttgtcaaaagagataaatgagtccttcaaacaatca
tcccaggcaaggacaaaactcccaacgggtattgagctgagtgtccatgtcttaacaaca
gggtattggcctacatatccaccaatggatgttcggcttccacatgagctaaatgtctat
caggacattttcaaggagttctacttgagcaagtacagtgggaggcgcttaatgtggcaa
aattcccttggtcattgtgtactgaaggcagagttcccgaaaggtagaaaggaactggca
gtgtcactatttcagactgttgttctgatgctgtttaacgatgcccacaagcttagcttt
caagacattaaggattcaacaggtattgaggataaagagcttagaaggaccctgcaatcg
cttgcatgcggaaaagttcgcgtagttcaaaagatccccaaagggagagatgtggaggat
aatgactcctttgtgttcaatgaagaatttagtgccccactctaccgcataaaggtaaat
gcaatccaaatgaaggagacagtggaggagaatacaagtactactgaaagagtatttcag
gaccggcaatatcaggtcgatgcagccattgtccgaataatgaagacaaggaaagtactg
agccacaccctcttgataactgagctcttccagcagctcaagtttccaataaagccagct
gatttaaagaaaaggatagaaagtctcattgacagggaatacctcgagcgcgacaaaagt
aatccacagatatacaactatctggcctga

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