Telopea speciosissima (New South Wales waratah): 122640176
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Entry
122640176 CDS
T07910
Name
(RefSeq) protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122640176
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
122640176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
RNA12
Motif
Other DBs
NCBI-GeneID:
122640176
NCBI-ProteinID:
XP_043689266
LinkDB
All DBs
Position
9:61266055..61268693
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AA seq
659 aa
AA seq
DB search
MAELENLLLQAAGRTSGPGGNRRLPSRRRREGSYSDDGSDSKDDDSDDDLGYKSRKPSGS
QVPLKKRLDPIEKDDDRDSQGDDDYEDDEHRGGSSDESDVGSDLYKGDEDRENLAQMTEL
EREYILSERATRRDDLKLKETVRAKQSGKKSEPVKETTPPPRLRSSARSADRAAAKDDAL
NELRLKRKKQQDPEGHWRSKDAARGGSSGRGSSPVKRRGILTASPSSSSQSESQSGSHSR
DDGSTGDGDLGDSDDDRADDGRDRPAFEDVKNITIRRSKLAKWLMEPFFEELIVGCFVRV
GIGMSRSGKSIYRLCIVRNVDATDPNRQYKLENKTTYKYLNCVWGNESSAARWQMARVSD
ASPLLEEFNEWVREVERSGGRMPTRQVVLEKRETIQKMTNTFVYSAATVKQMLQEKKSAS
SRPMNIAAEKQRLRREMDVAESRRDEVELERLQGRLKELEAMSRQVKEKDSKAVRLAEMN
KKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSMNYYVSKPGGGEETVASANGNA
VSAETVLGGNNNGRERTRAEAGMAATVAALEAAADAGKLVDTNAPVDLGTESNSLHDFEL
PISLAGLQKFGGPHGAHAGFLARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcggagttggaaaacctgcttctgcaggccgcaggaagaactagtggcccggggggg
aaccggcgtctgccttcaagaaggagaagagaaggttcgtattctgatgatggaagtgat
tcaaaggatgatgactcagatgatgatctaggctacaaaagccggaaaccttctggctct
caagttcctctgaagaagaggttggaccccatcgagaaggatgatgatcgggatagccag
ggagatgatgactatgaagatgatgaacaccgaggtggcagcagtgatgaatctgatgtt
ggtagtgatctctacaagggtgatgaagatagggaaaaccttgcccagatgaccgaattg
gagcgagaatatattctctccgaacgggccactagaagagatgatctaaaactgaaagag
acagtgagagcaaagcagagcggaaagaagtctgagcctgtaaaagagactacacctccc
cctcgtttgcgctcatcagctagatccgctgatagggcagctgccaaggatgacgcactg
aatgagctacgattaaagcggaagaaacagcaggacccagagggtcattggagatcaaag
gatgctgccagaggaggttcaagtggccggggttcctctcctgtcaagcgtagaggcatt
ctgactgcaagtccaagtagctctagccaaagtgaaagtcaaagtggtagccacagcagg
gacgacggatcaactggggatggggacttgggtgatagtgatgatgatagggcggatgat
gggagggaccggccagcatttgaggatgtcaagaacatcaccataagaaggtccaaacta
gccaaatggctcatggagcccttttttgaagagttgattgtaggttgctttgtgagggtt
gggattgggatgtccaggtctgggaagagtatctataggttgtgtattgtccgtaatgtc
gatgctacagacccaaaccgccaatacaagctggagaacaaaaccacatacaagtacctc
aactgtgtgtggggtaatgagagctcagctgccaggtggcagatggccagagtatcagat
gcctctccgctccttgaggagtttaatgagtgggtccgtgaggtggagcgtagtggggga
aggatgcccacccggcaagttgtgctggagaagagggagaccatacagaagatgaccaac
acttttgtctactctgcagctactgtgaagcagatgctgcaggagaagaaatctgcctcc
tcaaggccaatgaatatcgctgctgagaagcaacggctgaggagggagatggatgtggca
gaaagccggagggatgaggtagagctggagaggttacaggggaggctgaaggagctggag
gctatgtctcggcaggtgaaggagaaagattccaaggctgtcagattggcagagatgaac
aagaaaaacagagctgaaaacttcaagaatgcatcagaattgaagccagtgaacacaagt
ctgaaagctggggaagcaggttatgatccgttttcaaggagatggacaaggtcaatgaac
tattatgtttcaaagcctggtggaggagaagagactgttgcatctgcaaatggaaatgca
gtttcagcagaaacagtcttgggaggaaacaacaatggaagagagagaaccagggcagaa
gctggaatggctgcaactgtggcagctttagaagcagcagctgatgcaggaaagttggtg
gatacaaatgcacctgttgatctagggacagaatcaaactcgctgcatgactttgagttg
ccaatatcattggcaggacttcagaagtttgggggaccccatggagcccatgcaggattt
ctagccaggaagcagaggatagaggcaacggtcggatgccgtgtaccagaaaacgatggg
aggagacatgctttgacactgacagtgagtgattacaagcgacggagaggtcttctttga
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