Telopea speciosissima (New South Wales waratah): 122640271
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Entry
122640271 CDS
T07910
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00040
Pentose and glucuronate interconversions
tss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122640271
Enzymes [BR:
tss01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122640271
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
122640271
NCBI-ProteinID:
XP_043689355
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Position
9:4875499..4877177
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AA seq
394 aa
AA seq
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MAFAIHFLLISCLLAAYLVSTSQAWGGYGYGYGHGFGHKSPVKNVVMNKIDGCWRLNSNW
AANRRALANCATGFGEGAIGGKYGKIYVVTTPADDPVNPRPGTLRYGAIQTEPLWIIFER
DMVIKLQNELIMNSYKTIDGRGAKVEIAYGPCITIQGVSHVIVHGISLHDCTAGNSGMVR
SSPSHVGHRQGSPGDGIQVLASSNVWIDHCYFARCTDTLLDIIHASTAITVSNNYFTQND
EVVLLGHNDGYTADKIMTVTLAYNYFGPGCNQRMPRIRFGYAHVVNNRYDQWGLYAIGGS
SNPTILSQGNYFVASNNPGSKQVTKRICGGGWEGWKWRSSGDLFLNGAYFVQSGYGSCNP
QYGGYQSFTAAPAFMVPTLTAGAGPLQCYAGRRC
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgcaatccatttcctcctcatctcttgtctacttgcagcatatctagtctca
acctcacaagcttggggaggctatggctatggctacggtcatggttttgggcataaatct
ccagtgaagaatgttgtcatgaacaaaattgacggttgctggcgcttgaattctaactgg
gcagccaatcgtcgtgccttagccaactgtgccacaggctttggtgaaggagcaattgga
ggaaaatatggaaaaatttacgtagttactactccggccgatgatccggttaatccgagg
cccggtacccttaggtatggtgcaatccaaacagagcctttgtggataatatttgagagg
gatatggtcattaagctacaaaatgagctcattatgaatagttataagactatagatggg
agaggagctaaggtggagatagcttatggaccttgcatcacaatacaaggtgtgagccat
gttatagtacatggaattagtttacatgattgtacagctgggaattctgggatggttcgt
agctctccgagtcatgtcggccatcgacaaggatcacctggtgatggtattcaagtgttg
gcttcctcgaatgtctggattgatcactgctatttcgcacgatgcaccgataccctactt
gatataatccatgcttcgacagccattactgtctccaacaattatttcacccaaaacgac
gaagtggttctgttgggacacaatgatggttatactgcggacaagattatgacagttaca
ttggcttataactattttggcccaggttgtaatcaaagaatgccaaggattaggtttgga
tatgcccatgtagtgaacaatagatacgatcagtggggactgtatgctatcggtgggagt
tccaatccaacgatccttagtcaaggaaattactttgttgcctccaacaatcctggttcg
aaacaggtgactaagagaatttgtggagggggatgggagggttggaaatggaggtcgtcc
ggtgacttatttttgaacggagcttattttgttcagtctggatatgggtcatgtaaccca
caatatggtggctaccagtcgttcacagctgccccggcattcatggtgcctaccctaaca
gccggtgcaggtcctctccaatgttatgcaggacgacggtgctga
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