Telopea speciosissima (New South Wales waratah): 122640275
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Entry
122640275 CDS
T07910
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00040
Pentose and glucuronate interconversions
tss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122640275
Enzymes [BR:
tss01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122640275
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
122640275
NCBI-ProteinID:
XP_043689357
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Position
9:4955205..4957127
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AA seq
394 aa
AA seq
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MACAIHFLLFSCLLAAFLVSSSQAWGGYGYGYGHGFGHKSPGKNVVMNKIDGCWRLNSNW
AANRRALANCATGFGEGAIGGKYGKIYVVTTPADDPVNPRLGTLRYGAIQTEPLWIIFER
DMVIKLQNELIMNSYKTIDGRGAKVEIAYGPCITIQGVSHVIIHGISLHDCTAGKSGMVR
SSPSHLGHRQGSPGDGIQVFASSNVWIDHCYFARCADTLLDIIHASTAITISNNYFTQND
EVILLGHNDGYTADKSMKVTLAYNYFGPGCNQRMPRVRFGYAHVVNNRYDQWGMYAIGGS
SNPTIFSEGNYFVASNNPGSKQVTKRICGGGWEGWKWRSSGDLFLNGAYFVQSGYGSCNP
QYGGYQYLTAAPAFMVPTLTAGAGPLQCNARRRC
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtgcaatccatttcctcctcttctcttgtctacttgcagcatttctagtgtca
agctcacaagcttggggaggctatggctatggctacggtcatggttttgggcataaatct
ccagggaagaatgttgtcatgaacaaaattgacggttgctggcgcttgaattctaactgg
gcagccaatcgtcgtgccttagccaactgtgccacaggctttggtgaaggagcaattgga
ggaaaatatggaaaaatttatgtagttactactccggccgatgatccggttaatccgagg
ctcggtacccttaggtatggtgcaatccaaacagagcctttatggataatatttgagagg
gatatggtcattaagctacaaaatgagctcattatgaatagttataagaccatagatggg
agaggagcaaaggtggagatagcctatggaccttgcatcacaatacaaggtgtgagccat
gttataatacatggaatcagtttacatgattgtacagctgggaagtctgggatggttcgt
agctctccgagccatcttggccatcgacaagggtcacctggtgatggcattcaagtgttt
gcttcatctaacgtctggattgatcattgttattttgcacgatgcgccgatactctcctt
gatataatccatgcttccacagccattactatctccaataattactttacccaaaatgac
gaagtgattctgttgggacacaatgatggttatactgcagacaagagtatgaaagttact
ttggcttataactattttggcccaggttgtaatcagaggatgccaagggtaaggttcggg
tatgcccatgtagtgaacaacagatatgatcagtggggaatgtatgctatcggtgggagt
tccaatccaacgatctttagtgaaggaaactactttgttgcctccaacaatcctggttcg
aaacaggtgactaagagaatttgtggaggaggatgggagggttggaaatggaggtcttcc
ggtgacttatttttgaacggagcttattttgttcagtctggatatgggtcatgtaaccca
caatatggtggctaccagtatctcacagctgctccggcattcatggtgcctaccctaaca
gccggtgcaggtcctctccaatgtaatgcaagacgccggtgttga
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