Telopea speciosissima (New South Wales waratah): 122640278
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Entry
122640278 CDS
T07910
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00040
Pentose and glucuronate interconversions
tss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122640278
Enzymes [BR:
tss01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122640278
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122640278
NCBI-ProteinID:
XP_043689362
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Position
9:4959936..4962950
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AA seq
391 aa
AA seq
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MASATHSLFFSCLVAAFLVSSSQAYLGGYGYGYGSGSSSGKKVMNKIDACWRSNSNWASN
RRALADCAIGFGEEAIGGKYGKIYVVTTSTDDPINPKPGTLRYGAIQTQPLWIIFSRDMV
IKLQNELMMNSFKTIDGRGAKVEIAYGPCITVQGVSHVIIHGISLHDCTPGKSGMVRSSP
NHVGHRLGSPGDAIQVFASSNVWIDHCYFARCADGLTDVTHGSTAVTISNNYFTQHDEVM
LLGHSDTFTADKIMKVTVAFNYFGPGCVERLPRVRFGYCHVVNNRYDQWLMYAVGGSANP
TIFSEGNYYVAPNSRPFKQVTKRQSAGGWDNWKWRSSGDLFFNGAYFVQSGYGSCSPPYG
GYQSFIAAPAFMVPDLTADAGALHCVAGRLC
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcaacccattccctcttcttctcgtgtctagttgcagcatttttggtctca
tcttcacaggcgtacttgggaggttacggctatggctatgggtctggatcttcgtcaggg
aagaaagtaatgaacaaaattgatgcttgttggcgttcaaattcaaactgggcatcaaat
cgccgtgccttggccgactgcgctataggctttggtgaggaagcgattggaggaaaatac
gggaaaatttacgtagttaccacttccacagatgatccaattaatccaaagccaggtaca
cttcggtatggtgcaatccaaacacaacctctatggataatattttctagggatatggta
attaagctacagaatgagcttatgatgaacagttttaagacaatagatgggagaggggct
aaggttgagatagcttatggaccttgcatcacagtccaaggtgtgagtcatgttataata
catggaattagtttacatgattgtacacctgggaaatctggaatggttcgtagctctccg
aaccatgttggccatcgactagggtctcctggtgatgccattcaagtgtttgcttcgtcg
aacgtctggattgaccattgctatttcgcacgatgcgccgatggtctcactgatgtaacc
catggctcaacagccgtcactatctccaacaactacttcacccaacacgacgaagtgatg
ctgttggggcatagcgatacttttactgcggacaagattatgaaagttacagtggccttc
aattattttggcccaggttgtgtggagaggctgccaagggtcaggtttgggtattgccat
gtagtgaacaatagatatgatcaatggctaatgtatgctgttggtgggagtgccaatcca
accatctttagcgaaggaaactactatgtagcccccaacagtcgtcctttcaaacaggtg
actaagagacagtctgcgggaggttgggacaattggaaatggaggtcttccggggattta
tttttcaatggagcttattttgttcaatctggatatgggtcatgttccccaccatatggc
ggctaccagtcattcatagctgccccggcattcatggtgcctgacctaacagccgatgct
ggtgctctccattgtgttgcaggacgactgtgctga
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