Telopea speciosissima (New South Wales waratah): 122640563
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Entry
122640563 CDS
T07910
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tss03009
]
122640563
Enzymes [BR:
tss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122640563
Ribosome biogenesis [BR:
tss03009
]
Eukaryotic type
Pre-60S particles
Helicases
122640563
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
122640563
NCBI-ProteinID:
XP_043689719
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All DBs
Position
9:complement(24579637..24618559)
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AA seq
799 aa
AA seq
DB search
MAEEENINVSSKAELKRREKQKKKAKSGGFESLGLSHNVFRGIKRKGYRVPTPIQRKTMP
LILAGADVVAMARTGSGKTAAFLVPMLERLKQHVPQGGVRALILSPTRDLALQTLKFTKE
LGRFTDLRISLLVGGDSMESQFEELALNPDIIIATPGRLMHHLSEVDDMSLRIVEYVVFD
EADSLFGMGFAEQLHKILGQLSETRQTLLFSATLPSALAEFAKAGLRDPQLVRLDLETRI
SPDLKLAFFTLRQEEKAAALLYLIREHISSDQQTLIFVSTKHHVEFLNILFREEGIEPSV
CYGDMDQDARKIHISKFRARKTMFLIVTDVAARGIDIPLLDNVINWDFSSKPKLFIHRVG
RAARAGRTGMAFSFVTSEDLPYLLDLHLFLSKPVRPAPTEEEVLQDIDRVLSKIDQAVAN
GETVYGRFSQTVIDLVSDRVREVIDSCTELVTLQKTCNNAFRLYSKTKPLPSKESIRRAK
VLPREGLHPIFKNVLGGSELTALAFSERLKTSRPKQTILEAEGEAAKSKHLQGPASQWVD
VMKKKRSVHEGIINFVHHQRSINQASKDGQSESSFSVEEERTVSKDKEIKEDRCSKKKAK
SFKDEEYYISLVPTNQHLEAGLSVRANQGFGSSRLESAVLDLVADDDSGMQKQKSVYHWD
KRGKKYIKLNNGERVTASGKVKTEGGSKVKATKTGIYKKWKERSHKKISLKGMSTEPGSG
EATGSTGDHRMQGYNRMFKGGKNHHSLPNAHVRSELKNPEQIRKERQKNASRMSHAKNKS
AKGKKFGKNAKRKSKVRKL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagaaaatattaatgtaagctccaaagcagaactgaaaagaagggagaaa
cagaagaagaaagccaagtctgggggattcgagtctctgggtctaagccataatgtcttc
cgaggcatcaaacgcaagggttatagggtccccacgcccatacagcggaagacgatgcca
ctcatactcgccggtgcagacgttgttgccatggccaggactggctctggtaagactgct
gctttccttgtaccgatgctcgagcggttaaagcagcatgtccctcaaggtggggttagg
gctctcattctttctcccactagagacttggcgcttcagactttaaagttcaccaaagag
cttggtcgatttacagatcttcgtattagtttattggttggcggtgacagcatggaaagc
cagtttgaagaattagcactgaatcctgatatcattattgcaactcctggtaggctcatg
catcatttgtctgaggttgatgatatgtcattgcgtattgtggaatacgtggtgttcgat
gaagctgactccctctttggcatgggctttgctgagcagttgcataaaatccttggacag
ctgagtgaaacccgtcagacattgcttttcagtgcaacattacctagcgctcttgctgag
tttgccaaagcgggattgcgagatcctcaacttgtacggcttgatttagagacaagaatt
agccctgacctgaagcttgcttttttcactttacggcaggaagaaaaagcggctgcactc
ttgtatttgattagggaacatatcagttctgatcagcagactttgatttttgtttctaca
aagcatcatgtggagtttctgaatattctttttagagaagagggtattgagccttctgta
tgttatggtgatatggatcaagatgctcgaaagattcatatatcaaagtttagggcaaga
aagacaatgtttctaattgtgacagatgttgcggccagaggtattgatatcccattgctt
gataatgttatcaactgggacttttcttcaaaacctaaactttttatccatagagtgggc
cgggctgctcgagcaggtcggactgggatggcgttctcttttgtcacatcagaagatttg
ccttaccttttagatcttcatctgttcctctcaaagccagttagacctgctcctactgag
gaggaggttcttcaagacatagatagagtattatctaaaattgaccaagcagttgcaaat
ggcgaaacagtttatgggcgtttttcccagacagttatagatcttgtttcggatagagtt
cgggaagttattgattcatgcacagaactggttactttgcaaaaaacttgtaataatgca
tttcgcttgtattcaaagacaaagcccttaccctcaaaggagtccattagaagagcgaag
gttctgcctcgtgaaggactgcatccaatttttaaaaatgttttaggaggcagtgagttg
acagcgctggccttctctgaacgcttgaaaacttctagaccaaagcagaccattttggaa
gcagaaggtgaagctgctaaatcgaaacacctacaaggtcctgccagccaatgggttgat
gtcatgaagaagaaaagatctgttcatgaagggatcatcaacttcgttcatcaccaacgc
tctatcaatcaggcatcaaaggacggtcaatctgaaagctctttttcagtggaggaggag
agaacagtttcaaaggacaaggagataaaagaagatcggtgttctaaaaaaaaggcaaag
agctttaaagatgaggagtactacattagtttagtacctacaaatcaacatttggaggcg
ggactctcagtaagagctaaccagggctttggatcaagcaggttggaatctgctgtcctt
gatttagttgcagatgacgatagtggaatgcagaaacaaaaatctgtgtatcattgggat
aagaggggtaaaaagtacatcaagttaaacaatggtgaacgtgtgacagccagtggaaag
gtaaagaccgagggcggctctaaagtgaaagccaccaagacaggtatatacaagaagtgg
aaagaaaggtcacacaagaagatatctctcaaaggaatgagtactgaacctggttctgga
gaggctactggttcaacaggggaccatcggatgcaaggatataacagaatgttcaaaggt
gggaagaatcatcattcattgccaaatgctcatgtccgctcagaattaaaaaatcctgaa
caaattcgaaaagaaaggcaaaagaatgcaagcagaatgtctcatgccaagaacaaatct
gcaaaggggaagaagtttggaaaaaatgcaaagaggaaaagcaaagtgagaaaattatag
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