Telopea speciosissima (New South Wales waratah): 122640697
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Entry
122640697 CDS
T07910
Name
(RefSeq) ELAV-like protein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122640697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122640697
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122640697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_Nup35
Poty_coat
Motif
Other DBs
NCBI-GeneID:
122640697
NCBI-ProteinID:
XP_043689871
LinkDB
All DBs
Position
1:complement(3952442..3983386)
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AA seq
512 aa
AA seq
DB search
MVDFFSTGSERLATMCPAGKKLVVLGLPWDVDTEGLRQYMSQFGELADVMVMKDRASGRS
HGFGYVTFSSLEDVEKAVAAQHHINGRTLEVKVATPKEEMLSSFSSKKSTRIFVARVPPS
VGDDEFHSYFMKYGPVIDVYMPKDPVTKQHRGIGFVTYENHDSVDQLMSETHELGGSTIA
VDRATPKEEFRGSRVSNHYLKMPQTFRMSNIVESKKSDTYSRILTNTISVGNNGGHAAES
SLTRTKKKMFIGHVPAEATSDDLHAYFSQFGWVVDVYLPKDPKKVSHRGFGFVTFADEAS
AARVARRRHFIHGREIAVDSASPTDHVHDTGHIPVSPVPYFGGQHGLPPNELVVGATTEG
ENATHPSTASSSKWGKKLFIGRIPVEATAIDVRLHFSQFGHVLDVYLPKDDTKTSHRGFG
FITFAEEISAEYASQKVHRILGQKIVLDRAAPLENDETSTNRSSAVVAAISDHSIHTQQN
LFTHQPYDSKLMQFRDTSTSQPFRTSLRYGPY
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggttgattttttctctacgggttctgaaagactagcaacaatgtgtcctgctggcaaa
aaattggtggtattgggtcttccttgggatgttgatactgaagggttaagacagtacatg
agccagtttggcgagttggctgatgttatggtgatgaaggatcgtgcatcgggacgctcg
catggttttggttatgtaacattttcttctttggaagatgtggagaaagcagttgcagct
caacatcatattaatggaaggacactcgaggttaaagttgcaactcccaaggaggaaatg
ctgtcttctttttcttccaagaaaagtactcgtatatttgttgctagagtacctccaagt
gtgggtgatgatgaatttcacagctatttcatgaagtatggtccagtaatagatgtttac
atgccaaaggatcctgtaacaaagcaacatcggggaattggatttgtcacatatgaaaat
catgactccgtagaccagctaatgtcagagacacatgaacttggcggttctacaattgct
gtggatcgagcaactccaaaggaggaattcagaggatccagggtttctaatcattatctc
aagatgccacaaactttcagaatgtccaatatagttgaaagtaagaaaagcgatacctat
tcaagaatattaacaaataccatttcagttgggaacaacggtggacatgctgccgaaagt
tccctcacaagaaccaagaaaaagatgttcataggtcatgttcctgcggaagccacatct
gatgatttgcacgcgtattttagccagtttggatgggttgttgacgtttacctgccaaag
gatccgaagaaagtttctcatagaggctttggtttcgtaacatttgcagatgaagcttca
gctgcacgtgtggcccgccgtagacattttattcatggtcgagagattgctgtagactct
gcgtctcctacagatcatgtgcatgatacaggacatattcctgtgagtccagttccctat
tttggaggtcaacatggcctgcctcctaatgaattggtggttggagccacaactgaaggg
gagaatgccacccatccatctactgcttcaagttctaagtggggaaagaaacttttcatt
ggacgcattccagttgaggccactgctattgatgtgcggttgcatttcagtcagtttgga
catgtattggatgtatatcttcccaaggatgacacaaaaacttctcatagagggtttggt
tttatcacatttgctgaagagatctcagccgagtatgcttctcaaaaagtacataggatt
ctaggacagaagatcgtgttggatcgtgcagctccactagaaaatgatgaaacgagtaca
aatcgctcttctgctgttgttgccgcaatttcagatcactctattcatacacagcaaaat
ttattcacccatcaaccctatgacagcaagttgatgcaattccgtgatacctccacaagt
cagccatttagaacttcattgcggtatgggccttattag
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