Telopea speciosissima (New South Wales waratah): 122640711
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Entry
122640711 CDS
T07910
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03440
Homologous recombination
tss03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122640711
03460 Fanconi anemia pathway
122640711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tss03032
]
122640711
03400 DNA repair and recombination proteins [BR:
tss03400
]
122640711
Enzymes [BR:
tss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
122640711
DNA replication proteins [BR:
tss03032
]
Eukaryotic type
DNA Topoisomerases
122640711
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
122640711
FA (Fanconi anemia) pathway
122640711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
zf-CCHC
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
122640711
NCBI-ProteinID:
XP_043689885
LinkDB
All DBs
Position
9:57719037..57796494
Genome browser
AA seq
927 aa
AA seq
DB search
MAGGGGGSIMVLNVAEKPSVAKAVAGILSRNQGLRVREGRSRYNKIFEFDYTIRGQRCHM
LFTSVTGHLMELEFEERYRKWHSCDPADLYHAPVRKFVPQDKLDIKKTLEEEARKCQWLV
LWLDCDREGENISFEVVETCTAVNRYLNVWRARFSALIDREIHESVQTLVRPNQLFSDAV
DVRQEIDLRIGASFTRFQTMLLKDAFTIDVATDERNLVISYGPCQFPTLGFVVERYWEIQ
SHEPEEFWTINCSHSSDEGIATFSWMRGHLFDYMCAVIIYEMCILEPTATVTKVRHHEKL
KYPPHPLNTIELEKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDGFSARTDLHGIV
QEQERHPVWGPYAQRLLDPGAGLWRNPTGGGHDDKAHPPIHPTKFSGGESGWSQDHHQRL
YELVVRHFLACVSQPAIGAETTIEIDIAGESFSACGRVIIAKNYLDVYRFESWGGSVIPT
YVVGQQFNPTTLTLDPGVTRPPPLLSEADLLTCMDKAGIGTDATMHDHIKKLLDRFYATK
DQNTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKEVSLGSKRRAEVLETCLQQM
KACFLDARLNKAKLLEAMAIFFERSNRPGRDEQNLVVGIVRPCGACQESNMVLKRKPDGN
FMVGCMGFPQCRNVIWLPGSISEAVVTSQVCNSCTPGPVYKIQFKFRRLEIPPDYNVDHL
GCIGGCDETLRQLTEICGTGPHNLSNMTARGQGSAATTSNSQRTTSRQRACVHCGQSGHS
SNNCSSQTSRSQRIQPRGTNLQNGESSIPCNLCRTPCILRTANTANNRGRKFYKCQSQDC
YFFMWEDSIGENNGGIGGRGTTRANSRSANSNSRSSRTGGRGRGGRSGARTTEVRFVSAT
GEPISGRSCYVCGDPSHFANVCPNRGT
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcggtggtggcggttcgattatggtactgaacgtggcggagaagccatcggtg
gcgaaagccgtggcagggatcctatcaaggaatcaaggcctgcgtgtacgagaaggccgg
tctcgttacaacaagatcttcgagttcgattacaccatccgtgggcagcgatgtcacatg
ttgttcacctccgtcaccggccatctcatggagcttgaattcgaagagcgatatcgcaag
tggcattcctgcgaccccgccgacctctaccacgcccctgtacgcaagttcgtccctcag
gacaagttggatatcaagaagacattggaggaggaagccagaaagtgccagtggcttgtc
ttgtggcttgattgtgatagagaaggtgaaaatatatcgttcgaagtggtagagacatgc
actgctgtgaatcgctatcttaatgtgtggagggctagattctctgctttgatagacagg
gagatccatgaatctgttcaaactcttgtccgacccaatcaattgttttcagatgcagtg
gatgttaggcaggaaattgacctccggattggtgcttctttcactaggtttcagaccatg
ctgttgaaagatgcatttaccattgacgttgcaacagatgaaaggaatcttgttataagt
tatggtccatgtcagttcccaacacttgggtttgttgtcgaacggtattgggagatacag
tcacacgagcctgaagagttctggacaatcaactgttctcattcctccgacgaaggcatt
gctactttcagttggatgcgtgggcatctttttgattacatgtgtgctgttataatatat
gagatgtgtattctggaacccactgcaactgtcacgaaagttagacatcatgagaagctg
aagtatcctccacaccctttgaatactattgagcttgagaaacgtgcatcaaggtacttc
aggatgagttctgaacatactatgaaggtggcagaagaactatatcaagctggtttcatc
agctacccacgtacagaaacagacggtttctcagcaaggactgacttgcatgggattgtg
caagaacaagaacggcatcctgtgtggggcccatatgcacaacggctactagatcctgga
gcaggactttggagaaatcctactggtggtggacatgatgacaaggcacatccacctatt
catcccacaaaattttctggtggagaatctggatggagtcaggaccaccaccagagattg
tatgagcttgttgttcgccattttctggcctgtgtttcacagccagctataggagctgag
actactattgaaattgatattgctggcgaatccttttctgcatgtgggcgtgttataata
gcaaaaaattacctggatgtgtatcgatttgaatcttggggaggttcagtaatcccgaca
tacgttgttggacaacagtttaacccgacgacattgactcttgatcctggtgttacaaga
ccaccccctcttttaagtgaagctgatttactgacttgtatggataaggctggcattggt
actgatgcaacaatgcatgatcacataaaaaagctgcttgaccggttctatgcaactaaa
gaccagaacacccgtttctcaccaacaaatcttggtgaggcactggtgatgggatatgat
gacatggggtatgagctctggaaaccgtaccttagatccatgatggaatgtgacatgaaa
gaagttagcttaggcagcaagaggagagctgaagtcttggagacttgcttgcagcagatg
aaagcttgcttcttggatgcaaggttgaacaaagcaaaacttttggaagccatggcgatt
ttctttgagagatccaaccgaccgggtagagatgagcagaatcttgttgtcgggattgtt
cggccatgtggtgcctgccaagaatctaatatggtgctaaaacgaaaaccggatggcaat
ttcatggttggatgcatgggctttccacagtgtaggaatgttatttggcttccagggtcc
atatcagaagcagttgtgacctctcaagtttgtaactcttgcactccaggtcctgtttac
aagattcaatttaagtttcgtcggcttgagataccgccggactacaatgttgaccatttg
ggttgcattggtggctgtgatgagacgcttagacaattgacagaaatttgtgggacaggt
ccccacaatctttccaatatgacagcgcgagggcagggatcagcggcaactactagtaac
tcccaaagaacaacgtcaaggcaaagagcctgcgtacactgtgggcaaagtgggcattct
tccaataattgctcttcccagacttcacgctctcaacgcattcagcctcgtggaacaaac
ttgcaaaatggagaatcttctatcccttgtaacttatgtcgaacaccatgcatactgcga
actgccaatacagccaataataggggaaggaaattctacaaatgccaatcacaggattgt
tatttctttatgtgggaggatagcattggtgaaaataatggtggcataggaggaagaggt
actacacgtgcgaacagccgttcagcaaactccaactctaggtctagcaggacgggtggc
cgtggcaggggtggacgaagtggagcacgaaccacagaagtgaggtttgtgtcagcaact
ggcgaacccatttctggtaggagctgttatgtttgtggagatccttcacactttgcaaat
gtctgcccaaatcgagggacatga
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