Telopea speciosissima (New South Wales waratah): 122640714
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Entry
122640714 CDS
T07910
Name
(RefSeq) nuclear cap-binding protein subunit 2-like isoform X1
KO
K12883
nuclear cap-binding protein subunit 2
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03013
Nucleocytoplasmic transport
tss03015
mRNA surveillance pathway
tss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122640714
09122 Translation
03013 Nucleocytoplasmic transport
122640714
03015 mRNA surveillance pathway
122640714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122640714
03041 Spliceosome [BR:
tss03041
]
122640714
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
122640714
Spliceosome [BR:
tss03041
]
Common components
Common spliceosomal components
Cap binding complex
122640714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
122640714
NCBI-ProteinID:
XP_043689891
LinkDB
All DBs
Position
9:16757854..16788621
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AA seq
253 aa
AA seq
DB search
MASLFKDPNKLSAYRDRRFQGSQEDFEHALQTSTTAYVGNMSFYTTEEQVYELFSRAGEI
KKIIMGLDKNTKTPCGFCFVLYYSRDDTEDAVKYISGTILDDRLIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSFPPVMPSHLDGRI
GGGYGHGGSHRQSRDYHRKRHREDDRRAPENSKRTSDYESQRTDDESRPEKNPRFRESGD
SDDEDEDDRKRRH
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgtttaaggatcctaacaagctttcagcatatcgggatagaagatttcag
ggttctcaggaagattttgaacatgcacttcaaacttcgacaactgcttatgttgggaat
atgtctttctacactacagaagagcaagtttatgaactgttctcgcgagctggcgagatt
aaaaaaatcatcatggggttggataagaacaccaaaaccccttgtggcttttgctttgtc
ctatattactctagagatgatactgaggatgctgtaaagtacataagtgggacaattctt
gatgatcgccttattcgtgtggatttcgattgggggttccaagaaggaaggcaatggggt
cgtggtcgaagtggtgggcaggtgcgggatgagtatcgtaccgactatgatcctggtaga
ggtggttatggaaaattggttcagaaagagctggaagcacaaaggcagctagtagattat
ggtacagggtctctgggctcttttccgccagttatgccatctcatttggatggtagaatt
ggtggaggctatgggcatgggggttctcacagacaaagtcgagattaccatcgcaagagg
cacagggaagacgatcgccgtgcaccagagaactcaaagagaacctctgactatgagtcc
cagagaactgatgacgagtccagaccggagaagaatccccgttttcgtgaaagtggtgat
tctgacgatgaagacgaagatgatcgaaagagacggcattag
DBGET
integrated database retrieval system
