Telopea speciosissima (New South Wales waratah): 122640887
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Entry
122640887 CDS
T07910
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tss03009
]
122640887
Ribosome biogenesis [BR:
tss03009
]
Eukaryotic type
90S particles
Other 90S particles
122640887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD_LRWD1
WD40_RFWD3
VPS8_N
Nop14
Motif
Other DBs
NCBI-GeneID:
122640887
NCBI-ProteinID:
XP_043690098
LinkDB
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Position
9:complement(48674365..48695036)
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AA seq
525 aa
AA seq
DB search
MKGRTRKKNPSSLANGIRNKKSRVSLDRDPFFNSDSKRRRRKIDDDDDAGIIDSDETDEE
AERLAASDGGEEVEEVDSEFEKETADEKRLRLAKAHLEKIREIARMEQDEEELGDEGDEE
EKAGNRDSLVAKMLQQEQLEESGRVRRLIASRVQKPTSVDQFRVLVKHRQSVTAVALAAD
DLRGFSASKDGTIIHWDVESGKSEKYAWPSKETLSLHGAKDPQNSSMKWSKHILALDVSS
DGRYLATGGLDRHVHLWDTRTRDHIQAFPGHKGPVSDLNFRQGTPQLFSASFDRQIKLWN
VEDRTYMQTLFGHQSDILTIDCLRKERVLTVGRDRSMRLYKVPEESQLVFRAPMASLECA
CFINNDEFLSGSDDGSVELWSMMRKKPVYIVKNAHAVLAPSEKLGSMNNGIISNGNRMEN
GSLKPENYCSAAHSWVSSVSVCSNSDLAASGAGNGAVRLWGIESDSARIRLLFELPLVGF
VNALAFAKSGRFLLAGVGQEQRLGRWGRIPDARNGVAVQSLKLSE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcagaacccgcaaaaagaacccttcttcactggccaatggaatcaggaataaa
aagtccagagtttctctagatagagaccctttcttcaacagtgattcgaagcgtaggaga
cgaaagattgatgatgatgacgatgctggtatcatcgacagtgatgaaactgatgaggaa
gcagaacgtcttgcagcttctgatggtggggaagaagttgaagaagtggactctgaattt
gaaaaagaaactgctgatgagaagcggctgagactagcgaaggcacatttggagaagatt
cgagagattgcgaggatggagcaggatgaggaagaactgggggatgaaggggatgaagag
gagaaagctgggaaccgtgattccttggttgctaagatgctgcaacaggagcaactcgaa
gaaagtggacgtgttcgaagattgattgcttccagggttcaaaaaccaacaagtgttgat
caatttcgagtcttagtgaaacaccggcaatcggttactgctgtagctttagctgcagat
gacttgagggggttttcagcttccaaagatggaactataatccattgggatgtggaaagt
gggaaaagtgaaaagtatgcatggcctagtaaggaaacactgagcttacatggtgctaag
gatccacaaaattcatccatgaagtggagtaaacacattttggcattggatgttagctct
gatggtcggtatttggctactggcggcttagaccgtcatgttcatttgtgggacacccgg
acacgggatcatattcaggcatttcctggtcataaaggaccagtatctgatttgaatttt
aggcaggggactccacagcttttctctgcttcctttgatcgacaaatcaagttatggaat
gtggaagacaggacttatatgcagaccttatttggtcaccaaagtgatatattgacaata
gactgtctacgtaaagaaagggtgttgaccgttgggcgtgatcgttctatgcgcttatat
aaggtccctgaggaatcccaattagttttccgtgctcccatggcatctttagagtgtgca
tgttttatcaacaatgatgaattcttatctggctcagatgatggaagtgttgagctttgg
agcatgatgcggaagaagcctgtgtatatcgtgaaaaatgcccatgcagtattagctcct
tccgaaaagttgggttcaatgaataatgggattatttccaatgggaatagaatggaaaat
ggcagcctcaagcctgaaaactattgttcagcagcacactcctgggtcagttcggtcagt
gtgtgtagcaacagtgatctagctgcatcaggagctggtaatggggcagttcgtctatgg
ggtatagaaagtgacagcgcaaggatccgactcttgtttgaactgcctttggttggattt
gtaaatgccctagcgtttgcaaaatctggacggttccttttagctggtgttggacaggaa
caacggctaggaagatggggacgtattccagatgcacgaaacggtgttgctgtgcaatcc
cttaagctctctgaatag
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