Telopea speciosissima (New South Wales waratah): 122640969
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Entry
122640969 CDS
T07910
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tss03041
]
122640969
Enzymes [BR:
tss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122640969
Spliceosome [BR:
tss03041
]
Complex C
Other components
Complex C specific factors
122640969
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122640969
NCBI-ProteinID:
XP_043690203
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Position
9:complement(19843154..19928504)
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AA seq
530 aa
AA seq
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MVDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKSMSDFFCNSKRHQGQGGEE
HVPRPEPAILSVEGRGFNVQVHYLEEPVSDYLQAAVSTVLLIHDQEPMGDILVFLTGQDD
IDAAVQLLTEEIHNQRKQSSRLIILPLYSGLPRAEQDLVFSPTPSRQRKVIISTNIAETS
LTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTE
EYFVKEMPAEGIPEMQRSNLVPCVIHLKALGIDNILGFDWPASPSPEAMIRALEVLYALG
ILDDDAKLTSPTGFQVAEFPLDPMISKMILSANQLGCPEEIITIAATLSVQSIWVSIRGA
QKELDEAKLRFAAAEGDLVTYLNVYKGFLQSGKSSQWCHKNFINYQAMKKVIEIREQLRR
IAQRLGIVSKSCDRETEVLRKAVTAGMFANACRLETFSQSGMYKTIRTSQEVYIHPSSVL
FRVNPKWIIYHSLVSTDRQYLRNVTAIDPSWLIEAAPHFYQHQMVNSIAH
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggtagatgaggctcatgaaaggtccatttcgactgatatcttattgggtctcctgaaa
aagatccaacgacgtagacctgagttgcgtctgataatctcctctgctacaattgaagcc
aaatcaatgtctgatttcttctgcaacagcaagcgacatcaggggcaaggaggtgaagaa
catgtaccaagaccagagcctgctattctatcagttgaaggtagagggtttaatgtacaa
gttcattatcttgaagaacctgtttctgactatctgcaagctgctgtttcaactgtcttg
ttgatccatgatcaggaacctatgggcgatattctggtattcctcaccggtcaagatgat
attgatgctgctgttcagttgctgacagaagaaatacacaatcaaagaaagcagtcctca
aggttgatcatcctgcctttgtactcgggacttccacgtgcagagcaggaccttgtgttt
tctcccacacctagtcgacagaggaaggttataatatcaactaatattgctgaaacatca
ttgacgttggagggaattgtttatgttgttgatagtgggttttcaaaacaacgcttctat
aatccgatttcagatattgaaaatttagtagtggcaccaatatcgaaggcttctgccaga
caaagggctggtagagctggaagagtacgtcctgggaaatgttataggctatatacagaa
gagtactttgtgaaggaaatgcctgctgaaggaatcccagagatgcagagatcaaatctt
gttccttgtgtaattcacttaaaggccttaggcatagataatattttaggctttgattgg
cctgcaagtccgtcgccagaagcaatgattagagcactggaagttctctatgcactcggg
atccttgatgatgatgcaaagcttacttcacccactggatttcaagtggcggagtttcca
ttagatccaatgatctcaaaaatgattttatctgcaaatcaactgggttgtccagaggaa
attatcaccattgcagcaactctgtctgttcagtctatctgggtttctattaggggagca
caaaaagagttggatgaagccaagctgcgatttgctgctgctgagggtgatcttgtgaca
tacctgaatgtatataaaggttttcttcagtctggtaaatcttctcagtggtgtcataaa
aactttattaattaccaagcaatgaagaaggttattgaaattagagagcaactccgcagg
atagcacaaaggctaggtatagtatcaaaatcatgtgatagggaaacagaggtactgagg
aaggcagttactgctggaatgtttgctaatgcatgtcgtttggaaacattcagtcagagt
gggatgtacaagactatcaggacttctcaagaagtttatatccatccatcgtctgtgctg
ttcagggtaaatccgaagtggattatctaccattctcttgtctccactgatcggcagtat
ttgcgcaatgtaactgctattgatccttcatggttaatagaggctgctcctcacttttat
cagcaccagatggtcaattctattgctcactga
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