Telopea speciosissima (New South Wales waratah): 122641128
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Entry
122641128 CDS
T07910
Name
(RefSeq) long chain acyl-CoA synthetase 8
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00061
Fatty acid biosynthesis
tss00071
Fatty acid degradation
tss01100
Metabolic pathways
tss01212
Fatty acid metabolism
tss04146
Peroxisome
Module
tss_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122641128
00071 Fatty acid degradation
122641128
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122641128
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tss01004
]
122641128
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tss04147
]
122641128
Enzymes [BR:
tss01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122641128
Lipid biosynthesis proteins [BR:
tss01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122641128
Exosome [BR:
tss04147
]
Exosomal proteins
Exosomal proteins of breast milk
122641128
Exosomal proteins of breast cancer cells
122641128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
122641128
NCBI-ProteinID:
XP_043690391
LinkDB
All DBs
Position
9:complement(1773575..1784222)
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AA seq
731 aa
AA seq
DB search
MGDSKQSHFSSPLLQSLAEGEYFLFGKNYGLYGIVGAVVLGLLIPILLSLAIVGKKKGKQ
RGLRVEVGGETGLTMRNARFTELVEVPWEGATTMAALFEQTCRKHAQFRFLGSRKLIAKD
EITAKDGRKFEKFHLGEYEWITYGEAVDRVSNFASGLVKLGHSMSSPAAIFSETRTEWFL
AFQGCFRQNITVVTIYASLGEDALIHSLNETQITTLICDCKQLKKLAAISSSLETIKNII
YFEDDGSTIPTDLLASMSNWTISSFSEVEKQGRANTTPARLPSKTDIAVIMYTSGSTGLP
KGVMMTHGNIVATAAAVMTVIPGLGSSDVYLAYLPLAHVFELAAEVVMMSVGCAIGYGSA
LTLTDTSSKIKKGTLGDATVLKPTLMAAVPAILDRVRDGVLNKVEEKGGLGKKLFNIGFK
RRLAAIEGSWVGAWGLEKVLWDAIIFKRIRSVLGGDIRFMLCGGAPLSGDTQRFINICVG
APIGQGYGLTETCAGAAFSEWDDDTVGRVGPPLPCAYIKLISWEDGGYRISDKPMPRGEV
VIGGCSVTSGYFKNDAKTAEVYKVDENGLRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQH
GEYISLGKVEAALSSSNYVDNIMVYADPFHNYCVALVVPSQKTLESWAQGAGVQYKDFSD
LCLKDEAVREVQQSLSKVAKDAKLDKFEFPAKMKLLPEPWTPESGLVTAALKLKREQLKA
KFKHELQKLYE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgggggattctaagcaaagccattttagctcaccattgttgcaaagcttggctgaggga
gagtactttttgtttgggaaaaactatggactgtatggaattgtgggtgcagtagttctt
ggtcttctcataccaatactactttccctggcaattgtgggtaagaaaaaaggtaaacaa
agggggttgagagtagaggttggtggtgagaccggtcttacaatgcgcaatgctagattc
actgaattggttgaagttccatgggaaggagccacaactatggcagctctctttgagcaa
acttgtagaaagcatgctcagtttcgattccttggttcaagaaagctcatcgctaaagac
gaaatcacagccaaggatggaaggaagtttgaaaagttccatctgggagagtatgaatgg
ataacatatggagaagcagttgatcgtgttagcaactttgcatcaggtctagtaaaattg
ggtcacagtatgagtagccctgctgcaattttttctgaaactcgaacagagtggttcctt
gcttttcagggctgtttccgccagaatattacagttgtcacaatttatgcgtctctagga
gaagatgcactcatccactcacttaatgagacacaaataacaaccttgatctgtgactgc
aagcaattgaaaaaattggctgcgataagctcaagtcttgaaactattaaaaacatcatt
tactttgaagatgatggatctactattcctacggatctcttagctagtatgagcaattgg
acaatttcatctttttctgaagtggagaagcaggggagagcaaatactactcctgcgaga
cttccatccaaaactgatattgcagtcatcatgtatacaagtggcagtacagggctaccg
aagggcgtgatgatgactcatggcaacattgtagcgactgcagctgctgttatgacagtg
attcctggattaggcagcagtgatgtatacctggcatacttgcccctagcacatgtgttt
gaacttgcagctgaggttgtgatgatgtctgtgggttgtgcaattggctacggttcagca
ttgaccttaactgacacctcaagtaaaataaagaaagggacgttaggagatgcaactgtg
ttgaagcctacccttatggctgcagttccagctattttagatcgtgttcgagacggggtg
ctgaacaaggttgaggaaaagggtgggttaggaaaaaaacttttcaacattggatttaaa
cgcagactggcagctattgagggaagctgggttggagcttggggactagaaaaagttttg
tgggatgccataatttttaaaagaatacgctctgttctgggaggagatatccgatttatg
ctttgcggtggagctcctttgtctggtgatacacaacgcttcatcaatatctgcgtaggg
gctcctataggccagggatatggcttgactgaaacatgcgctggagcagcattttctgaa
tgggatgatgacactgtgggtcgtgtgggtccacctcttccttgcgcttacattaagctg
atttcctgggaagacgggggttataggatttctgacaaaccaatgccacgaggagaggtt
gtaattggaggatgcagtgtaacttccgggtacttcaaaaatgatgctaaaactgcagag
gtttacaaagtggatgagaatggtctgcgatggttttacactggtgatattggacagttt
caccctgatggatgccttgaaatcattgataggaagaaagatattgtcaaacttcagcat
ggagagtacatctcccttgggaaggttgaggcagcactatcgtcaagcaactatgtggat
aatatcatggtctatgcagatcctttccacaattattgtgtagcattggtagtcccttca
cagaagacccttgaaagctgggcccaaggggctggtgtccagtacaaagacttctcagat
ttgtgcctcaaagatgaagcagttcgagaggtccagcaatccctttctaaggtggcaaaa
gatgctaagcttgacaagtttgaatttccagcaaaaatgaagcttttgccagagccatgg
acacccgagtctggattagtaactgctgctctcaagttaaagagggaacagttgaaggcc
aaattcaaacatgagcttcaaaagttatatgaatga
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