KEGG   Telopea speciosissima (New South Wales waratah): 122641429
Entry
122641429         CDS       T07910                                 
Name
(RefSeq) TATA-box-binding protein-like isoform X1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    122641429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tss03000]
    122641429
   03021 Transcription machinery [BR:tss03021]
    122641429
Transcription factors [BR:tss03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    122641429
Transcription machinery [BR:tss03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     122641429
  RNA polymerase III system
    TFIIIB
     122641429
  RNA polymerase I system
    SL1/TIF-1B
     122641429
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 122641429
NCBI-ProteinID: XP_043690598
LinkDB
Position
10:complement(62704235..62743150)
AA seq 204 aa
MVDHILEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMRQPKIVLLIFVSGKIVLTGAKVRDE
TYTAFENIYPVLAEFRKSQQWYDH
NT seq 615 nt   +upstreamnt  +downstreamnt
atggtagatcacatcttggaaggtagccaacctgtagatctttccaagcatccatctggc
attgttcctacgcttcagaacatagtatctacagtcaatttggactgcaagttggatctt
aaggctattgcactgcaagctcgtaatgcggaatacaaccctaagcgttttgctgctgtt
attatgaggattagagaaccaaaaactacagcattgatatttgcgtctggaaagatggtc
tgcactggagccaagagtgaacaacagtcaaaactggcagcaagaaagtatgctcgaata
attcagaaacttggttttcctgctaaatttaaggactttaagattcagaacattgttggg
tcctgtgatgtgaaatttcccattaggcttgaaggtcttgcatattctcatggtgccttt
tctagttatgaaccagaactcttccctggcctaatctatcggatgaggcaaccaaagatt
gtcttgctcatatttgtgtctggaaaaattgttctcacaggggctaaggtgagagatgaa
acatacacagcctttgagaacatatacccagttcttgcagaattcaggaaaagccaacaa
tggtatgaccattaa

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