Telopea speciosissima (New South Wales waratah): 122641639
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Entry
122641639 CDS
T07910
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122641639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122641639
Enzymes [BR:
tss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122641639
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
122641639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF5857
Motif
Other DBs
NCBI-GeneID:
122641639
NCBI-ProteinID:
XP_043690859
LinkDB
All DBs
Position
10:14510280..14602316
Genome browser
AA seq
1169 aa
AA seq
DB search
MGVGTETTPDYEALEQLFKPHIESFDYFVEAGMETMFGNIKPVEVFDPSTNSKLRIWFGK
PELFPPSKELKSGMRDPLYPFECRLARISYSGRFIADVCFQYNDGAVVREKFSFGQLPIM
LKSKVCHLRGADPLKLVSYKEEATEMGGYFILNGLERLARLLILPKRNYPTSVVRSSFIE
REVGFTDKAVTIRCVRVDQSAVTVKLYYLQNGSARLGFWIRGREFLLPVGVVLKALIDTN
DHEIYMSLTCCYSEAYQREKGAVGTQLLGERVKIILDEVRNLSLFTRLQCLLHIGEYFRH
VMDGLETERHSVVGEAVLREYIFVHLDNNDDKFNLLIFMLQKLFALVDQTAAPDNPDTLQ
FHEILLPGHLITIYLKDKLQEWLYKGRRLLTDEIKNKGKKFDFKSFADVKKVLDKNSPKQ
IGVAVENLFKTGRLVTQSGLDLQQKAGMTVQAERLNFLRFLSHFRAVHRGSSFAGLRTTT
VRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSFFDSQGNIRDFFKIRMSIQSVLV
AVGMTPSIPKLVRAGPPEVLFVLLDGRVIGSIHSSEVEKAVAHIRRLKLSRFSGIPEDLE
VGYVPLTMGGTYPGLYLFTSPSRFVRPVRNISLPSEEKQDIELIGPFEQAYMEIRCADGG
DGGRRNMFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIQFR
ADQKLYHLQTPQTPIVRTRAYTTYNVDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDR
GLCRGSIYQTETIDLAESDKSDQALKVFSRSNLDKSSHSLIDADGLPYVGQLLRPSDPYC
TVYNTVTSTTKNTILKGSEAVVVDYVAVDVRNYKKPLQKASIRFRRPRNPVIGDKFSSRH
GQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVD
ATPFASTVKNEKSSESSSLVDELGSMLTSYGFNYHGVEVLYSGVLGTELTCEIFIGPVYY
QRLRHMVSDKFQVRSTGAVDQVTRQPIKGRKRGGGIRFGEMERDSILAHGAAYLLHDRLH
TCSDHHIADVCSLCGSVLTASFMQPQKRAVREIGGLPPGRSAKKVICHACKTSKGMETVA
MPYVFRYLAAELAAMNIKITLKLSNDTEA
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttggtacagaaacgacgcctgactacgaggctctggaacagcttttcaaacca
cacatagaatctttcgattatttcgtcgaggctggaatggaaaccatgtttgggaacatc
aaacctgtcgaagtttttgatccctccaccaactccaagctccgaatttggtttggcaag
ccggaattattccctccttcgaaggaacttaagtctggcatgcgcgatcctctgtatccc
ttcgagtgtaggctagctcgaatctcgtattctggaagatttattgcggacgtttgtttt
caatacaatgatggggccgttgtgagagaaaaattcagttttgggcagcttcctataatg
ctaaagtcaaaggtttgccacttgagaggtgctgatcccctgaaactagtttcttacaaa
gaagaggcgactgaaatgggcgggtacttcatattgaatgggttggagagacttgcccgg
cttctaattttgcccaagcgaaattatccgacaagtgtggtgcggagttcatttattgaa
agagaagtaggatttactgataaagcagttacgataagatgtgtaagggttgatcaatct
gcggtaactgttaaattatactaccttcagaatggaagtgcgagacttggattttggata
agagggagagagttcttgcttcctgtgggcgttgtgttgaaggccctcatagacaccaat
gaccacgaaatatatatgagtttaacctgttgttatagtgaggcatatcagagggagaag
ggagctgttggcacgcaacttctgggtgaaagggtcaagattattctcgatgaagttcgg
aacttgtctcttttcactcgccttcagtgtttacttcatattggagagtacttccgacat
gttatggatggattagagaccgaaaggcattctgttgttggagaagcagttctaagggag
tacatattcgttcatcttgataacaacgatgacaaattcaatttgctcatctttatgcta
cagaagctttttgcccttgtagatcagactgctgctccagataacccagatactctgcaa
tttcatgaaattctacttcctgggcacttgattacaatctatctaaaggacaaattacaa
gagtggctatacaagggacgacgactccttacggatgagataaagaataagggcaaaaag
tttgattttaagagctttgccgatgtcaagaaggttctggataaaaattctcccaaacaa
attggtgtggctgttgagaatttgtttaaaactggaaggctggttacacaatctggcctg
gatttgcagcagaaagctggcatgactgttcaggcagagaggctcaattttctccgcttt
ctttcacattttcgagctgttcatcgcgggtcttcgtttgctggacttcgcacaacaact
gttcggaagttgctacctgaatcttggggttttctttgcccagttcacacacctgatggg
gaaccctgtgggttgctgaaccatttgacttctacttgccgaatcacgtccttctttgat
tcacaaggaaatattagagatttctttaaaatccgaatgtctatccagagtgtcttagtt
gcagtgggaatgacaccttcaattccaaagcttgtaagggctggtcctcctgaagtactt
tttgttcttttagatggacgtgtcattggctcaatccattcaagtgaagttgagaaagct
gttgcacatatacggagactaaagctttcaagattttcagggattcctgaggacttggag
gtgggttatgttcctttgaccatgggtgggacatatcctggcttgtaccttttcacgtct
ccttcaaggtttgttcggccagtgaggaatatttctctcccttcggaagagaaacaagat
atcgagcttattgggccatttgaacaggcctatatggaaataagatgcgctgatggtgga
gatggaggaaggagaaacatgtttcctgcgacacatgaagagatccatccgactggaatg
ctcagtgtggttgctagcctcacaccgtggtctgaccataatcaaagtccacgtaacatg
tatcagtgtcagatggcaaagcaaacaatgggtttctcttcacaagcaatacagtttcgt
gcagatcagaagctgtaccatcttcagactccacaaactcccattgtacgtactcgtgct
tacacaacatacaatgtggatgaattccccacagggacaaatgcaatagttgcagttttg
gcttattcaggatatgatatggaggatgccatgatcttgaataagtcttctgtagaccgt
gggctttgtcgtgggagcatttaccagacggaaactattgatctggcagaaagtgacaag
tccgatcaagctctgaaggtgttttctagaagtaacctagataagtcttcacattccttg
atcgatgctgatggccttccgtatgttggacagttactacgtccaagtgacccatattgt
accgtatacaatacagtgaccagtaccacaaaaaataccatattaaaaggttcagaagct
gttgttgtggactatgttgcagtagatgtgagaaattataagaagcctctacagaaggca
agtatccgtttccgacgcccaagaaatcctgtcattggagataagtttagcagtagacat
gggcagaaaggtgtttgctcacagctgtggcctgacattgacatgcctttctcaggagtt
acaggaatgcgaccggatcttattattaatccacatgcatttccttcaaggatgacaatt
gggatgcttttggaatctatagctgctaagggaggtagcctacatggaaagtttgttgat
gcaacgccttttgctagcacggtgaagaatgaaaaatcatctgaatcgagctcacttgtt
gatgaacttggttccatgcttacctcgtatgggtttaattatcatggagtagaagtgtta
tacagtggagttcttggaaccgagctgacttgtgaaatttttattgggcctgtttattat
cagcgtctccggcacatggtctctgataaatttcaggttcggtccactggagctgtggat
caagtcaccagacaacctatcaaaggaagaaagcgtggtggaggtattcgttttggtgaa
atggagcgggactcaatccttgcccacggggctgcatatttgttgcacgacagactccac
acatgctctgatcatcacatagctgatgtttgctcactgtgtggcagtgtcctcaccgct
tccttcatgcaaccacagaagagagcagtgagggaaattggtgggcttcctccagggagg
agtgcgaagaaggtcatctgccatgcctgtaagactagcaaagggatggaaactgtggcc
atgccttacgtattccggtatttggctgcagaattagctgctatgaacataaaaataacc
ctcaaattaagtaatgatacagaagcatga
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integrated database retrieval system
